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Cluster: HRGMv2_4336_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4336_1 HRGMv2_4336_1_248 226000 226605 - GT32
TC HRGMv2_4336_1 HRGMv2_4336_1_249 226602 228017 - 2.A.66.2.16
CAZyme HRGMv2_4336_1 HRGMv2_4336_1_250 228432 229352 - GT2
CAZyme HRGMv2_4336_1 HRGMv2_4336_1_251 229528 230529 - GT2
NULL(UNKNOWN) HRGMv2_4336_1 HRGMv2_4336_1_252 230552 231736 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4336_1 HRGMv2_4336_1_253 232358 233017 - Hexapep | Hexapep_2
CAZyme HRGMv2_4336_1 HRGMv2_4336_1_254 233038 234309 - GT4
CAZyme HRGMv2_4336_1 HRGMv2_4336_1_255 234306 235478 - GT4
TC HRGMv2_4336_1 HRGMv2_4336_1_256 235480 236091 - 9.B.18.1.2
TC HRGMv2_4336_1 HRGMv2_4336_1_257 236121 236885 - 8.A.3.2.1
TC HRGMv2_4336_1 HRGMv2_4336_1_258 236899 237789 - 8.A.3.2.4
Gene ID: HRGMv2_4336_1_248
Type: CAZyme
Location: 226000 - 226605 (-)
Gene ID: HRGMv2_4336_1_249
Type: TC
Location: 226602 - 228017 (-)
Gene ID: HRGMv2_4336_1_250
Type: CAZyme
Location: 228432 - 229352 (-)
Gene ID: HRGMv2_4336_1_251
Type: CAZyme
Location: 229528 - 230529 (-)
Gene ID: HRGMv2_4336_1_252
Type:
Location: 230552 - 231736 (-)
Gene ID: HRGMv2_4336_1_253
Type: pfam
Location: 232358 - 233017 (-)
Gene ID: HRGMv2_4336_1_254
Type: CAZyme
Location: 233038 - 234309 (-)
Gene ID: HRGMv2_4336_1_255
Type: CAZyme
Location: 234306 - 235478 (-)
Gene ID: HRGMv2_4336_1_256
Type: TC
Location: 235480 - 236091 (-)
Gene ID: HRGMv2_4336_1_257
Type: TC
Location: 236121 - 236885 (-)
Gene ID: HRGMv2_4336_1_258
Type: TC
Location: 236899 - 237789 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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