PROTEIN: HRGMv2_4336_1_252
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Protein File & Metadata
Source:
HRGMv2_4336_1_252.pdb
Genome ID:
Protein ID:
HRGMv2_4336_1_252
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Protein Sequence
MILFIVGSIA NGRITYYTGI SVLIIFIFFS KGRIPTHNLF FPYYPLFIYG IIISIIIATK 60 TTFSARDFLV GIIDFANPIL FIMIGAILTQ LINLNNFFKY LIFSGTFVSI FQLLLLALNI 120 NTADSINSLR MSMLPTPNII PLVMVLLIYR KVLNIEITKG IGTFAFLVVL ISFIATLSRT 180 LILEFLVYIL LFSLSNKFFK KNMLVYLIVI SGSLLTYTYL SASTLGNAFI EKIVKSITEM 240 SSGNDWNQLS NIIDNWRGYE VFSAKNQINS MGMFERIFGE GLASKIFVGP YAMYVGVDGM 300 SIPYLHNSFY TIMVKLGYFG VVYYCAFLIM NFLYFLNKSK LNPVYLLVPS TIVVLAVNSK 360 LMQGVIIMGH DSILLVVLGY LSSYIMNRQR LLKN 394
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HUG6-F1-model_v4 | 1 | 394 | 28 | 394 | 0.7195 |
0.7981 |
| AF-O25682-F1-model_v4 | 1 | 392 | 21 | 429 | 0.711 |
0.768 |
| AF-Q2G288-F1-model_v4 | 1 | 394 | 15 | 409 | 0.7106 |
0.7505 |
| AF-A0A0H3H4H7-F1-model_v4 | 1 | 389 | 19 | 387 | 0.7073 |
0.7728 |
| AF-P26471-F1-model_v4 | 1 | 388 | 23 | 404 | 0.7025 |
0.7535 |
| AF-X8F0V5-F1-model_v4 | 1 | 393 | 49 | 462 | 0.6883 |
0.7747 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q4JZZ9-F1-model_v4 | GT4 | 1 | 393 | 13 | 409 | 0.8691 |
0.9036 |
| AF-A0A6C0U049-F1-model_v4 | GT2 | 1 | 394 | 16 | 577 | 0.608 |
0.7737 |
| QSP96058.1 | GT2 | 1 | 394 | 19 | 581 | 0.6062 |
0.7731 |
| AF-A0A3Q9NIF5-F1-model_v4 | GT2 | 1 | 394 | 13 | 574 | 0.5998 |
0.7617 |
| AF-A0A1D9GRK7-F1-model_v4 | GT2 | 1 | 394 | 8 | 570 | 0.5991 |
0.7603 |
| AF-A0A0K1UBS5-F1-model_v4 | GT2 | 1 | 394 | 13 | 577 | 0.5984 |
0.7612 |
| AF-A0A212QE91-F1-model_v4 | GT2 | 1 | 394 | 13 | 577 | 0.5965 |
0.7586 |
| UII34295.1 | GT4 | 1 | 394 | 24 | 782 | 0.5829 |
0.781 |
| AF-D5MJ04-F1-model_v4 | GT9 | 1 | 394 | 34 | 541 | 0.5823 |
0.7775 |
| AF-B8DZR6-F1-model_v4 | GT9 | 1 | 394 | 50 | 477 | 0.5808 |
0.7779 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q4JZZ9 | GT4 | 1 | 393 | 13 | 409 | 0.8691 |
0.9036 |
| QSP96058.1 | GT2 | 1 | 394 | 19 | 581 | 0.6062 |
0.7731 |
| UII34295.1 | GT4 | 1 | 394 | 24 | 782 | 0.5829 |
0.781 |
| D5MJ04 | GT9 | 1 | 394 | 34 | 541 | 0.5823 |
0.7775 |
| USX27957.1 | GT9 | 1 | 394 | 23 | 555 | 0.5762 |
0.7638 |
| WBY01952.1 | GT9 | 1 | 394 | 24 | 557 | 0.5757 |
0.7672 |
| A0A0C5WHY3 | GT4 | 1 | 394 | 13 | 757 | 0.5659 |
0.7504 |
| H8L3P3 | GT2 | 1 | 394 | 27 | 667 | 0.5551 |
0.7327 |
| A0A517MXC4 | GT26 | 1 | 394 | 31 | 450 | 0.5478 |
0.7241 |
| K0J022 | GT4 | 1 | 394 | 16 | 755 | 0.545 |
0.7242 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7tpj-assembly1.cif.gz_B | 1 | 392 | 13 | 403 | 0.6677 |
0.7066 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HUG6-F1-model_v4 | 1 | 394 | 28 | 394 | 0.7195 |
0.7981 |
| AF-P26471-F1-model_v4 | 1 | 388 | 23 | 404 | 0.7025 |
0.7535 |
| AF-Q00474-F1-model_v4 | 11 | 385 | 4 | 390 | 0.6494 |
0.7098 |
| AF-Q6F7F9-F1-model_v4 | 1 | 391 | 17 | 407 | 0.6417 |
0.7644 |