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Cluster: HRGMv2_4320_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4320_141 HRGMv2_4320_141_1 321 1778 + 1.B.52.2.1
pfam HRGMv2_4320_141 HRGMv2_4320_141_2 1898 2800 + S1 | S1 | S1 | S1_RRP5
CAZyme HRGMv2_4320_141 HRGMv2_4320_141_3 2829 3653 + GH23
pfam HRGMv2_4320_141 HRGMv2_4320_141_4 3667 4101 + dUTPase | DCD
NULL(UNKNOWN) HRGMv2_4320_141 HRGMv2_4320_141_5 4131 4775 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4320_141 HRGMv2_4320_141_6 4978 6090 + 3.A.1.1.26
pfam HRGMv2_4320_141 HRGMv2_4320_141_7 6323 7423 + HTH_30 | GGDEF_2
TF HRGMv2_4320_141 HRGMv2_4320_141_8 7445 7882 + Rrf2
TC HRGMv2_4320_141 HRGMv2_4320_141_9 7949 9085 + 3.A.11.1.2
STP HRGMv2_4320_141 HRGMv2_4320_141_10 9273 10343 + dCache_2
TC HRGMv2_4320_141 HRGMv2_4320_141_11 10518 11054 + 1.B.52.2.1
Gene ID: HRGMv2_4320_141_1
Type: TC
Location: 321 - 1778 (+)
Gene ID: HRGMv2_4320_141_2
Type: pfam
Location: 1898 - 2800 (+)
Gene ID: HRGMv2_4320_141_3
Type: CAZyme
Location: 2829 - 3653 (+)
Gene ID: HRGMv2_4320_141_4
Type: pfam
Location: 3667 - 4101 (+)
Gene ID: HRGMv2_4320_141_5
Type:
Location: 4131 - 4775 (+)
Gene ID: HRGMv2_4320_141_6
Type: TC
Location: 4978 - 6090 (+)
Gene ID: HRGMv2_4320_141_7
Type: pfam
Location: 6323 - 7423 (+)
Gene ID: HRGMv2_4320_141_8
Type: TF
Location: 7445 - 7882 (+)
Gene ID: HRGMv2_4320_141_9
Type: TC
Location: 7949 - 9085 (+)
Gene ID: HRGMv2_4320_141_10
Type: STP
Location: 9273 - 10343 (+)
Gene ID: HRGMv2_4320_141_11
Type: TC
Location: 10518 - 11054 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Petralouisia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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