PROTEIN: HRGMv2_4320_141_5
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Protein File & Metadata
Source:
HRGMv2_4320_141_5.pdb
Genome ID:
Protein ID:
HRGMv2_4320_141_5
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Protein Sequence
MEERMVKFYA KDSNKVAIHA VPGHFSTGHS HINYYINITS LKSRISEARE LAKLLAAKFT 60 SNITVDTIVC MDGMDVVGAF LAEEMEKRNI MTITNLHETV YVVPPEFNSN NQMIFRDNSI 120 PAIQGKHVLL LLATTTTGVT IRRSLECIRY YGGTVVGVVS AFSTVKEVEG FQIECAFDEE 180 DVPGYATYPA NECPFCKKGH RVEAMVNGFG YSKM 214
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9PIR1-F1-model_v4 | 8 | 212 | 1 | 202 | 0.7148 |
0.7641 |
| AF-P56162-F1-model_v4 | 8 | 214 | 1 | 201 | 0.6934 |
0.7419 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4paw-assembly1.cif.gz_A | 12 | 206 | 1 | 197 | 0.7146 |
0.7775 |
| 1vch-assembly2.cif.gz_C | 3 | 185 | 1 | 169 | 0.6844 |
0.7883 |
| 1vch-assembly1.cif.gz_B | 3 | 186 | 1 | 170 | 0.6841 |
0.7856 |
| 1vch-assembly2.cif.gz_D | 3 | 186 | 1 | 173 | 0.6791 |
0.7745 |
| 7f06-assembly2.cif.gz_B | 3 | 194 | 3 | 174 | 0.674 |
0.7764 |
| 7f06-assembly1.cif.gz_A | 2 | 195 | 3 | 181 | 0.6677 |
0.7555 |
| 6fsp-assembly1.cif.gz_C | 5 | 185 | 1 | 171 | 0.663 |
0.7599 |
| 5w8v-assembly1.cif.gz_C | 1 | 214 | 25 | 205 | 0.5313 |
0.6344 |
| 2jbh-assembly1.cif.gz_B-2 | 1 | 214 | 29 | 211 | 0.5292 |
0.634 |
| 1qk5-assembly1.cif.gz_B-2 | 1 | 214 | 40 | 216 | 0.5198 |
0.6469 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q3AC07-F1-model_v4 | 11 | 212 | 2 | 191 | 0.7434 |
0.8156 |
| AF-Q9RX68-F1-model_v4 | 11 | 205 | 2 | 194 | 0.7293 |
0.7976 |
| AF-B5EQ26-F1-model_v4 | 9 | 213 | 1 | 194 | 0.7239 |
0.7902 |
| AF-B0KA31-F1-model_v4 | 9 | 212 | 1 | 189 | 0.7208 |
0.7965 |
| AF-A6LJP2-F1-model_v4 | 8 | 212 | 1 | 186 | 0.7182 |
0.8013 |
| AF-A1BJI2-F1-model_v4 | 12 | 213 | 2 | 192 | 0.7164 |
0.7903 |
| AF-A8FK23-F1-model_v4 | 8 | 213 | 1 | 202 | 0.7162 |
0.7656 |
| AF-A7H1T2-F1-model_v4 | 8 | 213 | 1 | 202 | 0.7161 |
0.7647 |
| AF-Q5HWM9-F1-model_v4 | 8 | 213 | 1 | 202 | 0.7158 |
0.7659 |
| AF-Q9PIR1-F1-model_v4 | 8 | 212 | 1 | 202 | 0.7148 |
0.7641 |