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Cluster: HRGMv2_4320_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4320_41 HRGMv2_4320_41_32 22667 23674 - GH18
TC HRGMv2_4320_41 HRGMv2_4320_41_33 23832 26414 + 3.A.3.2.21
TC HRGMv2_4320_41 HRGMv2_4320_41_34 26382 27017 - 2.A.107.3.1
STP HRGMv2_4320_41 HRGMv2_4320_41_35 27102 28190 + FIST
NULL(UNKNOWN) HRGMv2_4320_41 HRGMv2_4320_41_36 28201 28338 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4320_41 HRGMv2_4320_41_37 28332 29171 + 1.B.52.2.1
NULL(UNKNOWN) HRGMv2_4320_41 HRGMv2_4320_41_38 29173 30321 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4320_41 HRGMv2_4320_41_39 30339 30998 - G3P_acyltransf
CAZyme HRGMv2_4320_41 HRGMv2_4320_41_40 30995 32116 - GT28
CAZyme HRGMv2_4320_41 HRGMv2_4320_41_41 32307 34748 - GH94
TF HRGMv2_4320_41 HRGMv2_4320_41_42 35177 36199 + LacI
NULL(UNKNOWN) HRGMv2_4320_41 HRGMv2_4320_41_43 36243 37619 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4320_41 HRGMv2_4320_41_44 37815 38726 + 3.A.1.1.4
NULL(UNKNOWN) HRGMv2_4320_41 HRGMv2_4320_41_45 38732 38968 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4320_41 HRGMv2_4320_41_46 38962 39588 + 3.A.1.1.26
Gene ID: HRGMv2_4320_41_32
Type: CAZyme
Location: 22667 - 23674 (-)
Gene ID: HRGMv2_4320_41_33
Type: TC
Location: 23832 - 26414 (+)
Gene ID: HRGMv2_4320_41_34
Type: TC
Location: 26382 - 27017 (-)
Gene ID: HRGMv2_4320_41_35
Type: STP
Location: 27102 - 28190 (+)
Gene ID: HRGMv2_4320_41_36
Type:
Location: 28201 - 28338 (+)
Gene ID: HRGMv2_4320_41_37
Type: TC
Location: 28332 - 29171 (+)
Gene ID: HRGMv2_4320_41_38
Type:
Location: 29173 - 30321 (+)
Gene ID: HRGMv2_4320_41_39
Type: pfam
Location: 30339 - 30998 (-)
Gene ID: HRGMv2_4320_41_40
Type: CAZyme
Location: 30995 - 32116 (-)
Gene ID: HRGMv2_4320_41_41
Type: CAZyme
Location: 32307 - 34748 (-)
Gene ID: HRGMv2_4320_41_42
Type: TF
Location: 35177 - 36199 (+)
Gene ID: HRGMv2_4320_41_43
Type:
Location: 36243 - 37619 (+)
Gene ID: HRGMv2_4320_41_44
Type: TC
Location: 37815 - 38726 (+)
Gene ID: HRGMv2_4320_41_45
Type:
Location: 38732 - 38968 (+)
Gene ID: HRGMv2_4320_41_46
Type: TC
Location: 38962 - 39588 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Petralouisia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4320_41_44 vegetarian > vegan 1.35025 0.00694

🧭 Explore Read Mapping of CGC

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