PROTEIN: HRGMv2_4320_41_43
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Protein File & Metadata
Source:
HRGMv2_4320_41_43.pdb
Genome ID:
Protein ID:
HRGMv2_4320_41_43
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Protein Sequence
MKKKVVSVLL CLSIAAAMLA GCGSDNGESS TKTAGSGDNS GTETEGEEGK VLNVYCWNDE 60 FQRRIKDHYP SYEEVDATTG KIGDVTVKWN ITPNDDNAYQ NNLDATLLKQ EDAAADDKID 120 IFLVEADYAL KYVDTDYTVS VEDLGLTEAD LANQYQYTKD IVTDSNGVLK GVSWQGCPGA 180 LFYNRAAAKE VLGTDDPAAV QEYVKDWAAF EETAKTMKDK GYSIMSSVND SYRVYSNNVT 240 SKWVEDGKIN IDDNIMKWVD DSKKLVDAGE TETYELWSDD WKKGFYPEGK VFCYFGPAWL 300 VNFSMAADTE GSIGYEGGWG ATEGPQGFFW GGTWICAATG TDNQSLIKDI MYQMTCKEDI 360 MTEIVKDDDD FVNNKPAMDN MAVDTSYSSK VLGGQNPLSI YCAGVEDLDL SNLSSYDQGC 420 NEEFQNAMKN YFEGNATKDE ALDQFYKAVV EKYPELTY 458
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F002-F1-model_v4 | 45 | 456 | 43 | 439 | 0.7217 |
0.8258 |
| AF-A0A133CPC5-F1-model_v4 | 44 | 457 | 30 | 423 | 0.7179 |
0.8142 |
| AF-Q8DNN7-F1-model_v4 | 48 | 456 | 33 | 435 | 0.708 |
0.7987 |
| AF-A0A132Z3C8-F1-model_v4 | 48 | 456 | 32 | 428 | 0.7063 |
0.8021 |
| AF-P71619-F1-model_v4 | 26 | 457 | 24 | 428 | 0.7054 |
0.7915 |
| AF-K0F2E6-F1-model_v4 | 46 | 457 | 40 | 436 | 0.7029 |
0.8087 |
| AF-A0A133CDW9-F1-model_v4 | 17 | 457 | 31 | 443 | 0.6869 |
0.7648 |
| AF-P59214-F1-model_v4 | 43 | 458 | 35 | 423 | 0.6818 |
0.7838 |
| AF-Q5F6Q5-F1-model_v4 | 28 | 436 | 25 | 380 | 0.6111 |
0.7283 |
| AF-Q9I6J1-F1-model_v4 | 21 | 433 | 18 | 367 | 0.6039 |
0.7201 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 3 | 457 | 223 | 866 | 0.5559 |
0.7359 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| K8EJG7 | CBM50 , CE4 | 47 | 458 | 33 | 416 | 0.6757 |
0.7813 |
| A0A9Q8PNJ5 | GH4 | 3 | 457 | 223 | 866 | 0.5559 |
0.7359 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 47 | 454 | 1 | 393 | 0.8077 |
0.8836 |
| 8bfy-assembly1.cif.gz_A | 50 | 455 | 2 | 393 | 0.7579 |
0.836 |
| 3uor-assembly2.cif.gz_B | 48 | 457 | 1 | 388 | 0.751 |
0.8362 |
| 6x84-assembly2.cif.gz_B | 47 | 457 | 1 | 411 | 0.7463 |
0.8059 |
| 7vfq-assembly1.cif.gz_A | 48 | 458 | 1 | 394 | 0.7457 |
0.8192 |
| 7vfq-assembly2.cif.gz_B | 48 | 458 | 1 | 396 | 0.7446 |
0.8161 |
| 2z8d-assembly2.cif.gz_B | 44 | 458 | 1 | 399 | 0.7443 |
0.8136 |
| 2z8d-assembly1.cif.gz_A | 45 | 458 | 1 | 401 | 0.7438 |
0.8115 |
| 7vfr-assembly1.cif.gz_A | 48 | 458 | 1 | 397 | 0.7437 |
0.8143 |
| 7c0k-assembly1.cif.gz_A | 48 | 456 | 14 | 396 | 0.7433 |
0.8381 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P29822-F1-model_v4 | 47 | 455 | 26 | 422 | 0.7559 |
0.8486 |
| AF-Q9KEE7-F1-model_v4 | 15 | 457 | 21 | 445 | 0.7405 |
0.8012 |
| AF-Q926H8-F1-model_v4 | 48 | 457 | 20 | 428 | 0.706 |
0.7813 |
| AF-Q55471-F1-model_v4 | 25 | 456 | 18 | 421 | 0.7002 |
0.7756 |
| AF-O32156-F1-model_v4 | 23 | 457 | 16 | 422 | 0.6997 |
0.7719 |
| AF-Q8YCA7-F1-model_v4 | 48 | 457 | 25 | 433 | 0.6974 |
0.775 |
| AF-Q2YKR5-F1-model_v4 | 48 | 457 | 25 | 433 | 0.6959 |
0.7729 |
| AF-Q8FW10-F1-model_v4 | 48 | 457 | 25 | 433 | 0.6953 |
0.7726 |
| AF-Q578E6-F1-model_v4 | 48 | 457 | 25 | 433 | 0.695 |
0.7719 |
| AF-Q8UB32-F1-model_v4 | 48 | 458 | 26 | 436 | 0.6938 |
0.7699 |