Cluster: HRGMv2_4319_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: fructan
- Genome ID: HRGMv2_4319
- CGC Family ID: CGCFAM_00035
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4319_5 | HRGMv2_4319_5_28 | 25002 | 25934 | + | 3.A.1.1.10 |
| TC | HRGMv2_4319_5 | HRGMv2_4319_5_29 | 25950 | 26843 | + | 3.A.1.1.29 |
| NULL(UNKNOWN) | HRGMv2_4319_5 | HRGMv2_4319_5_30 | 26858 | 28537 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4319_5 | HRGMv2_4319_5_31 | 28534 | 30003 | + | GH32 |
| STP | HRGMv2_4319_5 | HRGMv2_4319_5_32 | 30000 | 30971 | + | PfkB |
| pfam | HRGMv2_4319_5 | HRGMv2_4319_5_33 | 31059 | 31334 | + | SpoIIID |
| TC | HRGMv2_4319_5 | HRGMv2_4319_5_34 | 31463 | 32584 | + | 2.A.45.2.6 |
Gene ID: HRGMv2_4319_5_28
Type: TC
Location: 25002 - 25934 (+)
Type: TC
Location: 25002 - 25934 (+)
Gene ID: HRGMv2_4319_5_29
Type: TC
Location: 25950 - 26843 (+)
Type: TC
Location: 25950 - 26843 (+)
Gene ID: HRGMv2_4319_5_30
Type:
Location: 26858 - 28537 (+)
Type:
Location: 26858 - 28537 (+)
Gene ID: HRGMv2_4319_5_31
Type: CAZyme
Location: 28534 - 30003 (+)
Type: CAZyme
Location: 28534 - 30003 (+)
Gene ID: HRGMv2_4319_5_32
Type: STP
Location: 30000 - 30971 (+)
Type: STP
Location: 30000 - 30971 (+)
Gene ID: HRGMv2_4319_5_33
Type: pfam
Location: 31059 - 31334 (+)
Type: pfam
Location: 31059 - 31334 (+)
Gene ID: HRGMv2_4319_5_34
Type: TC
Location: 31463 - 32584 (+)
Type: TC
Location: 31463 - 32584 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.