PROTEIN: HRGMv2_4319_5_30
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Protein File & Metadata
Source:
HRGMv2_4319_5_30.pdb
Genome ID:
Protein ID:
HRGMv2_4319_5_30
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Protein Sequence
MSKKGRKIIC AALSGAILLS LTACGQGGVA QADIDPDTPI SEVTFPLEET RELSFITNAP 60 ARTEQDPNKR IIFQRLEEQT NVHIDWTCFV SDQFADKKNL ALAQFGALPD GLFVAGMGDY 120 DLLRYAKQGI IIPLENLIDK YMPNLQAVFE KYPEYRVMCT APDGHIYAFP WIEQLGEGKE 180 AIQAIGNIPY INKKWLDFLN LEVPTTTAEL EEVLIAFRDH ADEIEAEFDI TGDVIPMSFI 240 INNGDQDPAF LINGFGEGYG DTGDHFAVTD EGEVIYTAVQ EGYKEGIAWL HHLVEEGVVD 300 PEAFTQDWST YVAKGKNHRY GLCFTWDIAN IDNYEDYVML PALAGPEGVV NVTRQNGSET 360 SGFERGRCVL TSNCRDTALA AAWIDQMYAP LQSAQNNWGT YGEEGTPNIF EMSVNDAGEP 420 MLRHLDLGDN SPVEVRENQS VNGPLAVLND YYGVYVTLPD DAKWRLDNMH ATYLEDMHSK 480 YVFPNVFMSL EDTNRVSQLD TDIKRYAEQM KASWILNGGI EEEWDEYLER MESYGLSEYL 540 QIKQKYFDAY QESLQEDAP 559
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CZN8-F1-model_v4 | 1 | 553 | 4 | 502 | 0.671 |
0.7306 |
| AF-A0A133D019-F1-model_v4 | 12 | 553 | 14 | 485 | 0.6669 |
0.7492 |
| AF-Q8DRJ6-F1-model_v4 | 14 | 555 | 34 | 514 | 0.6281 |
0.7156 |
| AF-Q8DNU2-F1-model_v4 | 33 | 542 | 27 | 445 | 0.6108 |
0.7342 |
| AF-A0A133CDW9-F1-model_v4 | 1 | 542 | 5 | 444 | 0.6081 |
0.6998 |
| AF-A0A133CPC5-F1-model_v4 | 44 | 539 | 30 | 423 | 0.6074 |
0.7513 |
| AF-A0A0H3GX53-F1-model_v4 | 47 | 543 | 21 | 428 | 0.6063 |
0.733 |
| AF-K0F7X1-F1-model_v4 | 30 | 539 | 27 | 409 | 0.6053 |
0.7551 |
| AF-Q8DNU8-F1-model_v4 | 6 | 542 | 3 | 440 | 0.6028 |
0.6941 |
| AF-K0EMP7-F1-model_v4 | 31 | 542 | 26 | 442 | 0.6015 |
0.7251 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 34 | 553 | 35 | 506 | 0.7165 |
0.8193 |
| A0A9Q8PNJ5 | GH4 | 1 | 542 | 151 | 866 | 0.466 |
0.5874 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 34 | 553 | 35 | 506 | 0.7165 |
0.8193 |
| A0A1Q2TKJ3 | GH49 | 1 | 542 | 13 | 797 | 0.4859 |
0.595 |
| A0A7U1BNH7 | GH10 | 48 | 548 | 27 | 745 | 0.4765 |
0.6082 |
| A0A9Q8PNJ5 | GH4 | 1 | 542 | 151 | 866 | 0.466 |
0.5874 |
| A0A242CSU4 | CBM35 | 48 | 559 | 572 | 1002 | 0.4226 |
0.6766 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5g62-assembly2.cif.gz_B | 51 | 555 | 1 | 491 | 0.9163 |
0.9804 |
| 5g5y-assembly1.cif.gz_A | 48 | 557 | 1 | 494 | 0.8181 |
0.8835 |
| 5xs8-assembly1.cif.gz_A | 50 | 547 | 1 | 474 | 0.7964 |
0.873 |
| 6fth-assembly1.cif.gz_A | 48 | 553 | 1 | 496 | 0.7952 |
0.8563 |
| 4tqu-assembly1.cif.gz_Q | 43 | 555 | 3 | 492 | 0.7903 |
0.8578 |
| 3omb-assembly1.cif.gz_A | 32 | 552 | 1 | 503 | 0.7897 |
0.8452 |
| 5h6u-assembly1.cif.gz_A | 44 | 552 | 1 | 487 | 0.7866 |
0.8551 |
| 3vlw-assembly2.cif.gz_B | 43 | 551 | 1 | 489 | 0.7845 |
0.8514 |
| 6jhx-assembly2.cif.gz_B | 43 | 549 | 3 | 483 | 0.7829 |
0.8572 |
| 5suo-assembly1.cif.gz_A | 50 | 552 | 1 | 451 | 0.6864 |
0.776 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H2URD6-F1-model_v4 | 30 | 557 | 28 | 538 | 0.836 |
0.9082 |
| AF-P37966-F1-model_v4 | 16 | 552 | 2 | 502 | 0.7113 |
0.7676 |
| AF-Q795R2-F1-model_v4 | 11 | 552 | 1 | 498 | 0.6617 |
0.7211 |
| AF-Q8FVS7-F1-model_v4 | 48 | 542 | 22 | 411 | 0.6399 |
0.7866 |
| AF-Q578M8-F1-model_v4 | 48 | 542 | 22 | 411 | 0.6392 |
0.7858 |
| AF-Q2YKZ9-F1-model_v4 | 48 | 542 | 22 | 411 | 0.6389 |
0.7855 |
| AF-A0A0H2UMY0-F1-model_v4 | 49 | 555 | 37 | 491 | 0.6236 |
0.7303 |
| AF-Q7LYW7-F1-model_v4 | 42 | 542 | 36 | 450 | 0.6135 |
0.7465 |
| AF-O07009-F1-model_v4 | 37 | 542 | 29 | 418 | 0.6087 |
0.7564 |
| AF-O32156-F1-model_v4 | 23 | 542 | 15 | 422 | 0.6074 |
0.7287 |