Cluster: HRGMv2_4319_CGC54
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4319
- CGC Family ID: CGCFAM_01086
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4319_133 | HRGMv2_4319_133_1 | 3 | 1613 | + | GH32 |
| TC | HRGMv2_4319_133 | HRGMv2_4319_133_2 | 1644 | 2561 | + | 3.A.1.1.10 |
| TC | HRGMv2_4319_133 | HRGMv2_4319_133_3 | 2572 | 3456 | + | 3.A.1.1.10 |
| NULL(UNKNOWN) | HRGMv2_4319_133 | HRGMv2_4319_133_4 | 3523 | 5157 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4319_133 | HRGMv2_4319_133_5 | 5213 | 7633 | + | GH3 |
Gene ID: HRGMv2_4319_133_1
Type: CAZyme
Location: 3 - 1613 (+)
Type: CAZyme
Location: 3 - 1613 (+)
Gene ID: HRGMv2_4319_133_2
Type: TC
Location: 1644 - 2561 (+)
Type: TC
Location: 1644 - 2561 (+)
Gene ID: HRGMv2_4319_133_3
Type: TC
Location: 2572 - 3456 (+)
Type: TC
Location: 2572 - 3456 (+)
Gene ID: HRGMv2_4319_133_4
Type:
Location: 3523 - 5157 (+)
Type:
Location: 3523 - 5157 (+)
Gene ID: HRGMv2_4319_133_5
Type: CAZyme
Location: 5213 - 7633 (+)
Type: CAZyme
Location: 5213 - 7633 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.