dbCAN Logo

PROTEIN: HRGMv2_4319_133_4

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_4319_133_4.pdb
Genome ID:
HRGMv2_4319
Protein ID:
HRGMv2_4319_133_4

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MKKRLMAVIL   ATVTLALSAC   GSQETDTTDT   AGATDSVSAE   QTGDAASGEA   EKDYSEHLVI 60
SLASVQVNES   VDYNNGDEFT   KWWTEKFNFE   WDVIGLSWDN   WAERLRVWIN   SGDMPDVATW 120
DYNHGEAMNY   IDQGLIYRLP   DDWKERWPNV   AKAYEDSQLG   PALEEMVGGT   YILPKPIFST 180
VKPTEKVVPH   ITVYLRKDWA   EAVGFELKDY   YTVSELLEYA   KLIKEQDPGN   VGSALVPIAV 240
RPEMALNFFV   KSNSTYAEGG   FYKDENGNYQ   WGPADEDTLT   GLKLYQQAFQ   EGLISPEFYA 300
YTGTDDNAEF   NVTGVAGATM   MQGMAGAMTQ   CETSMRDNLG   LAYDDTVHTC   FVIGEDGKYH 360
SPEQINYWTT   VIFSPDISQE   KFERYMDMMD   FASSEENNIF   LRMGFEGVDW   EYDENGEVVS 420
LLGDTVASEK   YPSVYPCYDA   MYILADEFQL   INPSYRKEFR   DRVVQLYEEK   YEMGDEETIP 480
SIDWDVQLYS   SDAKNKLSYN   WINEYAELVL   EEGDVETNWR   NWIEEQQYQI   QPVIDELNAE 540
FGGN 544
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 51 543 32 501 0.7052 0.7977
AF-A0A133D019-F1-model_v4 56 544 36 484 0.6797 0.7888
AF-A0A133CPC5-F1-model_v4 52 533 30 423 0.6348 0.776
AF-A0A133CDW9-F1-model_v4 54 539 41 444 0.6309 0.7721
AF-Q8DNU2-F1-model_v4 49 540 32 445 0.6263 0.7492
AF-A0A0H3GX53-F1-model_v4 53 537 20 428 0.6261 0.7464
AF-Q8DRJ6-F1-model_v4 2 544 15 511 0.6257 0.6844
AF-Q9CBN6-F1-model_v4 54 536 36 445 0.6233 0.7547
AF-K0F002-F1-model_v4 55 533 45 439 0.6232 0.7727
AF-P76042-F1-model_v4 53 533 24 430 0.6196 0.7426
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 50 544 41 506 0.7407 0.8442
AF-K8EJG7-F1-model_v4 CBM50 , CE4 55 537 32 417 0.6138 0.7592
AF-A0A7U1BNH7-F1-model_v4 GH10 54 544 27 745 0.5013 0.6433
A0A9Q8PNJ5 GH4 4 536 261 866 0.4955 0.6255
AF-A0A1Q2TKJ3-F1-model_v4 GH49 1 537 83 797 0.4942 0.6014
UJP10085.1 GH154 49 513 702 1167 0.3529 0.5837
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 50 544 41 506 0.7407 0.8442
K8EJG7 CBM50 , CE4 55 537 32 417 0.6138 0.7592
A0A7U1BNH7 GH10 54 544 27 745 0.5013 0.6433
A0A9Q8PNJ5 GH4 4 536 261 866 0.4955 0.6255
A0A1Q2TKJ3 GH49 1 537 83 797 0.4942 0.6014
UJP10085.1 GH154 49 513 702 1167 0.3529 0.5837
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5xs8-assembly1.cif.gz_A 57 542 1 474 0.7546 0.8231
4tqu-assembly1.cif.gz_Q 40 544 1 491 0.7482 0.8058
5h6u-assembly1.cif.gz_A 51 544 1 487 0.747 0.8072
6jhx-assembly2.cif.gz_B 40 544 1 483 0.7448 0.8075
3vlw-assembly2.cif.gz_B 40 543 1 487 0.7437 0.8056
5g62-assembly2.cif.gz_B 57 543 1 485 0.7349 0.7991
6fth-assembly1.cif.gz_A 54 543 1 495 0.7273 0.7884
3omb-assembly1.cif.gz_A 53 542 4 500 0.7163 0.7816
5suo-assembly1.cif.gz_A 56 544 1 448 0.7023 0.7896
5g5y-assembly1.cif.gz_A 54 543 1 487 0.6937 0.7581
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P37966-F1-model_v4 53 543 31 500 0.7439 0.8389
AF-A0A0H2URD6-F1-model_v4 48 543 38 531 0.6923 0.7742
AF-Q795R2-F1-model_v4 49 542 35 496 0.6857 0.7859
AF-Q8FVS7-F1-model_v4 54 537 22 411 0.6715 0.8154
AF-Q2YKZ9-F1-model_v4 54 537 22 411 0.6715 0.8155
AF-Q578M8-F1-model_v4 54 537 22 411 0.6712 0.8154
AF-Q7LYW7-F1-model_v4 50 540 37 450 0.648 0.7808
AF-Q9RUE8-F1-model_v4 53 540 17 420 0.647 0.7718
AF-A0A0H2UMY0-F1-model_v4 55 544 37 488 0.6313 0.7345
AF-O32156-F1-model_v4 55 540 29 422 0.6258 0.7634
Download Full SwissProt Results