dbCAN Logo

Cluster: HRGMv2_4319_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4319_113 HRGMv2_4319_113_2 255 1121 - 3.A.1.1.47
TC HRGMv2_4319_113 HRGMv2_4319_113_3 1133 2044 - 3.A.1.1.4
NULL(UNKNOWN) HRGMv2_4319_113 HRGMv2_4319_113_4 2166 3584 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_4319_113 HRGMv2_4319_113_5 3581 4699 - LacI
CAZyme HRGMv2_4319_113 HRGMv2_4319_113_6 5131 7566 + GH94
pfam HRGMv2_4319_113 HRGMv2_4319_113_7 7612 7884 - DUF6171
pfam HRGMv2_4319_113 HRGMv2_4319_113_8 7902 8441 - Rubrerythrin | RUBY_RBDX
TC HRGMv2_4319_113 HRGMv2_4319_113_9 8753 9889 + 3.B.1.1.5
Gene ID: HRGMv2_4319_113_2
Type: TC
Location: 255 - 1121 (-)
Gene ID: HRGMv2_4319_113_3
Type: TC
Location: 1133 - 2044 (-)
Gene ID: HRGMv2_4319_113_4
Type:
Location: 2166 - 3584 (-)
Gene ID: HRGMv2_4319_113_5
Type: TF
Location: 3581 - 4699 (-)
Gene ID: HRGMv2_4319_113_6
Type: CAZyme
Location: 5131 - 7566 (+)
Gene ID: HRGMv2_4319_113_7
Type: pfam
Location: 7612 - 7884 (-)
Gene ID: HRGMv2_4319_113_8
Type: pfam
Location: 7902 - 8441 (-)
Gene ID: HRGMv2_4319_113_9
Type: TC
Location: 8753 - 9889 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List