PROTEIN: HRGMv2_4319_113_4
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Protein File & Metadata
Source:
HRGMv2_4319_113_4.pdb
Genome ID:
Protein ID:
HRGMv2_4319_113_4
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Protein Sequence
MKKKVLSALL ATAMITAMLA GCGSEPAASE SQTASETPVS ESSSSEPSSE AADTGSGEAA 60 DEGKILNIYC WNEEFKTRLT DHYPGYTEVD GTTGTIGDVT VKWNITPSDD NAYQNNLDAA 120 LLKQADAAAD DKIDMFLIEA DYALKYVDTE YTMSVADLGI TDADLANQYQ YTKDIVTDSN 180 GVLKGLSWQG CPGVMVYSRD VATEVFGTDD PAVIQEKVAD WDSFKETAAE LAAAGYYMTS 240 SVNDTYRVYS NNVSTKWVVD GKIVIDDNLM NWVEDSKEMV DAGQTNTYEL WSDDWSKGFY 300 PEGKVFCYFG PAWFVDFSMA ADTEGSIANL GGWAATEGPQ GFFWGGTWIC AATGTDNASL 360 VKDIMLQLTT NEEIMTEIAE ADNDFVNNKP AMEAMAADTS YQSAVLGGQN PLAMYCAGAE 420 KIDLSNLSAY DQGCNEEFQN AMKNYFDGNA TLDEALDLFY KAVEEKYPEL TH 472
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DRJ6-F1-model_v4 | 62 | 472 | 61 | 499 | 0.5273 |
0.6392 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 3 | 470 | 227 | 866 | 0.5481 |
0.7194 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 3 | 470 | 227 | 866 | 0.5481 |
0.7194 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 61 | 468 | 1 | 393 | 0.8068 |
0.8929 |
| 3uor-assembly2.cif.gz_B | 62 | 471 | 1 | 388 | 0.7435 |
0.8383 |
| 6x84-assembly2.cif.gz_B | 61 | 471 | 1 | 411 | 0.7355 |
0.8048 |
| 8bfy-assembly1.cif.gz_A | 64 | 469 | 1 | 393 | 0.7325 |
0.8174 |
| 6wpn-assembly1.cif.gz_A | 65 | 472 | 1 | 395 | 0.7314 |
0.8136 |
| 7vfq-assembly1.cif.gz_A | 63 | 472 | 1 | 394 | 0.7307 |
0.8132 |
| 2z8d-assembly2.cif.gz_B | 58 | 472 | 1 | 399 | 0.73 |
0.8086 |
| 7vfq-assembly2.cif.gz_B | 63 | 472 | 1 | 396 | 0.7299 |
0.8106 |
| 7vfr-assembly1.cif.gz_A | 62 | 472 | 1 | 397 | 0.7299 |
0.8096 |
| 2z8d-assembly1.cif.gz_A | 59 | 472 | 1 | 401 | 0.7286 |
0.8055 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P29822-F1-model_v4 | 61 | 469 | 26 | 422 | 0.7436 |
0.8461 |
| AF-O31518-F1-model_v4 | 52 | 470 | 25 | 427 | 0.6865 |
0.7794 |
| AF-P58300-F1-model_v4 | 38 | 470 | 17 | 434 | 0.6343 |
0.7043 |
| AF-D4GP35-F1-model_v4 | 12 | 472 | 16 | 459 | 0.6278 |
0.6774 |
| AF-Q9V297-F1-model_v4 | 28 | 470 | 40 | 453 | 0.617 |
0.7036 |