Cluster: HRGMv2_4319_CGC35
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4319
- CGC Family ID: CGCFAM_00021
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4319_72 | HRGMv2_4319_72_5 | 4227 | 5390 | + | GH33 |
| TC | HRGMv2_4319_72 | HRGMv2_4319_72_6 | 5417 | 6403 | + | 3.A.1.1.10 |
| TC | HRGMv2_4319_72 | HRGMv2_4319_72_7 | 6400 | 7299 | + | 3.A.1.1.29 |
| NULL(UNKNOWN) | HRGMv2_4319_72 | HRGMv2_4319_72_8 | 7349 | 9061 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4319_72 | HRGMv2_4319_72_9 | 9037 | 11172 | + | GH142 |
| CAZyme | HRGMv2_4319_72 | HRGMv2_4319_72_10 | 11201 | 14377 | + | GH106 |
| TC | HRGMv2_4319_72 | HRGMv2_4319_72_11 | 14382 | 15059 | - | 9.B.34.1.3 |
Gene ID: HRGMv2_4319_72_5
Type: CAZyme
Location: 4227 - 5390 (+)
Type: CAZyme
Location: 4227 - 5390 (+)
Gene ID: HRGMv2_4319_72_6
Type: TC
Location: 5417 - 6403 (+)
Type: TC
Location: 5417 - 6403 (+)
Gene ID: HRGMv2_4319_72_7
Type: TC
Location: 6400 - 7299 (+)
Type: TC
Location: 6400 - 7299 (+)
Gene ID: HRGMv2_4319_72_8
Type:
Location: 7349 - 9061 (+)
Type:
Location: 7349 - 9061 (+)
Gene ID: HRGMv2_4319_72_9
Type: CAZyme
Location: 9037 - 11172 (+)
Type: CAZyme
Location: 9037 - 11172 (+)
Gene ID: HRGMv2_4319_72_10
Type: CAZyme
Location: 11201 - 14377 (+)
Type: CAZyme
Location: 11201 - 14377 (+)
Gene ID: HRGMv2_4319_72_11
Type: TC
Location: 14382 - 15059 (-)
Type: TC
Location: 14382 - 15059 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.