dbCAN Logo

PROTEIN: HRGMv2_4319_72_8

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_4319_72_8.pdb
Genome ID:
HRGMv2_4319
Protein ID:
HRGMv2_4319_72_8

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MKGKMMKKAI   ALVLCCGMTL   SMAACAGTEE   EQSGGSQLGS   GTQGTEAETE   VMQISWYNIN 60
PPYEDNSWGE   QTFEELFGVD   VEIVRAESED   ELSTLLAGGD   IPDVMILSSV   EQVASFQNLG 120
ILASVTEEEI   QEYMPSYYAM   CVAEDEDFFS   YSMIDGVNYG   IAKYKAASGI   AQAAVIRADW 180
LENCGFDSVP   TTLEELEEVF   TAFTYNDPDG   NGVDDTYALT   SGSDKEEGKR   FFSSIFGAYG 240
INPFCWTEQD   GEVVFGFATE   ECKEALKLLN   KWYGMGLIDP   EFVTDESRTS   GTDIAYKFAN 300
GITGFVDGFA   FDDYEWDNDA   HVNAKWVASN   ESWQEFFSAN   AGDEEALYGT   ANVTDFSDDM 360
IDPYYIVIPQ   IVGPAGENSG   YYAGSNISGY   ICFGVQLEDD   REKMYKVMDI   LEQQAADTDI 420
IINHWGPEGY   IWEWNEDGTE   RVWIENYSEK   EDYNAQGQTM   GNGQCLWPMY   VSNDAFLTII 480
GGARMSQRYE   VDMPMFAQMN   TVTDVVKVSL   SAATENPDLI   YAYPLEYIVK   AIRGDVDIDA 540
TWDDTVQTWY   DNGGTQLTEE   ANEWYQGTQK 570
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 21 570 19 502 0.7389 0.8282
AF-A0A133D019-F1-model_v4 14 570 15 485 0.649 0.7386
AF-Q8DNU8-F1-model_v4 20 561 12 440 0.6364 0.7507
AF-P9WGU9-F1-model_v4 47 557 27 464 0.6042 0.7196
AF-A0A133CKQ7-F1-model_v4 23 560 26 419 0.5914 0.734
AF-Q7AQ51-F1-model_v4 25 561 21 445 0.5864 0.702
AF-K0F8J3-F1-model_v4 21 560 17 434 0.5856 0.7041
AF-A0A0H3GKJ8-F1-model_v4 46 557 22 406 0.585 0.7328
AF-A0A0H3GKX2-F1-model_v4 18 556 18 396 0.5738 0.716
AF-P59214-F1-model_v4 47 560 35 423 0.5737 0.7229
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 49 570 42 506 0.6795 0.7946
AF-K8EJG7-F1-model_v4 CBM50 , CE4 47 560 29 417 0.5788 0.7244
AF-A0A1B0VLS2-F1-model_v4 CBM0 25 570 524 963 0.4549 0.723
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 49 570 42 506 0.6795 0.7946
K8EJG7 CBM50 , CE4 47 560 29 417 0.5788 0.7244
A0A1Q2TKJ3 GH49 11 560 271 797 0.4784 0.6056
A0A7U1BNH7 GH10 42 566 20 744 0.4708 0.582
A0A242CSU4 CBM35 25 570 556 994 0.4524 0.7271
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6fth-assembly1.cif.gz_A 48 570 1 496 0.7273 0.7936
3omb-assembly1.cif.gz_A 47 570 3 503 0.7249 0.7886
5g5y-assembly1.cif.gz_A 48 570 1 491 0.7236 0.7954
5xs8-assembly1.cif.gz_A 51 565 1 474 0.7007 0.7817
5h6u-assembly1.cif.gz_A 49 570 4 487 0.6844 0.7592
4tqu-assembly1.cif.gz_Q 49 570 7 491 0.6839 0.7613
3vlw-assembly2.cif.gz_B 49 569 6 489 0.6812 0.7578
6jhx-assembly2.cif.gz_B 49 567 7 483 0.6767 0.757
5g62-assembly2.cif.gz_B 51 570 1 489 0.6719 0.7421
5suo-assembly1.cif.gz_A 51 570 1 451 0.6514 0.745
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P37966-F1-model_v4 44 569 26 502 0.7597 0.8613
AF-Q795R2-F1-model_v4 15 570 8 498 0.7374 0.8123
AF-A0A0H2URD6-F1-model_v4 22 570 22 535 0.7023 0.7698
AF-P9WGU9-F1-model_v4 47 557 27 464 0.6042 0.7196
AF-Q9RUE8-F1-model_v4 40 560 9 420 0.5979 0.716
AF-Q00749-F1-model_v4 38 559 23 420 0.593 0.7304
AF-O06989-F1-model_v4 17 559 18 416 0.591 0.7237
AF-Q7LYW7-F1-model_v4 44 559 34 450 0.5884 0.7175
AF-O07009-F1-model_v4 48 560 31 421 0.5854 0.7318
AF-Q55471-F1-model_v4 49 557 27 421 0.5844 0.7253
Download Full SwissProt Results