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Cluster: HRGMv2_4318_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4318_29 HRGMv2_4318_29_84 95365 96573 + GT4
CAZyme HRGMv2_4318_29 HRGMv2_4318_29_85 96518 97351 + GT2
NULL(UNKNOWN) HRGMv2_4318_29 HRGMv2_4318_29_86 97326 98597 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4318_29 HRGMv2_4318_29_87 98594 99379 + ABC2_membrane
TC HRGMv2_4318_29 HRGMv2_4318_29_88 99427 101010 + 3.A.1.103.4
NULL(UNKNOWN) HRGMv2_4318_29 HRGMv2_4318_29_89 101033 103039 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4318_29 HRGMv2_4318_29_90 103079 104527 + LytR_cpsA_psr
TC HRGMv2_4318_29 HRGMv2_4318_29_91 104532 105926 + 9.B.18.1.3
CAZyme HRGMv2_4318_29 HRGMv2_4318_29_92 105948 107360 + GT2
CAZyme HRGMv2_4318_29 HRGMv2_4318_29_93 107373 109127 + GT2
CAZyme HRGMv2_4318_29 HRGMv2_4318_29_94 109141 111036 + GT2
Gene ID: HRGMv2_4318_29_84
Type: CAZyme
Location: 95365 - 96573 (+)
Gene ID: HRGMv2_4318_29_85
Type: CAZyme
Location: 96518 - 97351 (+)
Gene ID: HRGMv2_4318_29_86
Type:
Location: 97326 - 98597 (+)
Gene ID: HRGMv2_4318_29_87
Type: pfam
Location: 98594 - 99379 (+)
Gene ID: HRGMv2_4318_29_88
Type: TC
Location: 99427 - 101010 (+)
Gene ID: HRGMv2_4318_29_89
Type:
Location: 101033 - 103039 (+)
Gene ID: HRGMv2_4318_29_90
Type: pfam
Location: 103079 - 104527 (+)
Gene ID: HRGMv2_4318_29_91
Type: TC
Location: 104532 - 105926 (+)
Gene ID: HRGMv2_4318_29_92
Type: CAZyme
Location: 105948 - 107360 (+)
Gene ID: HRGMv2_4318_29_93
Type: CAZyme
Location: 107373 - 109127 (+)
Gene ID: HRGMv2_4318_29_94
Type: CAZyme
Location: 109141 - 111036 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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