dbCAN Logo

PROTEIN: HRGMv2_4318_29_89

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_4318_29_89.pdb
Genome ID:
HRGMv2_4318
Protein ID:
HRGMv2_4318_29_89

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MVMRLELYNA   LVNKVPGIRE   KYQTMRKRTS   GMGRAKCWLS   LIWWNISYHI   FRRQRNFEQD 60
QMLERKKWDA   SHSESASEAR   ETPEKTSAKL   KVYDVISFDV   FDTLIFRPFS   KPTDLFFETG 120
RRLGYPDFER   IRREMEWRAR   EKKYQEFRVR   EITLDAIWDM   MEQETGIPKE   RGMKTELDCE 180
MKYCFPNPYM   KEVVKALKQD   EKKIIITSDM   YLRKMQIQEL   LKRRGYPEFD   GYYVSCEYGV 240
SKGDKGLYEQ   IKKDYGTDIS   YVHVGDNPYS   DQKKAREAGF   VSIPYKNVND   AGEPYRSEDM 300
SVITGSMYRG   IVNTWIHNGS   HIFEKDYEFG   FIYGGLFVTG   YCQFIHEYAV   QHRTDKILFL 360
SRDGDILKQV   YDRIYPEDKT   EYVYWSRKVA   TILCAGYFKY   DYFRRFLYHK   INQDYTLEKI 420
FSSMQLTDML   EGFCRDYSYG   KDTKLTETVA   DQCKEYLQKY   WDGVLEHYEK   SSQAGKKYFE 480
KILMDCRNVL   AVDIGWAGSG   AIALDYLVNH   VWNLGCKVTG   MLAGTNTCHN   AEPDASESFL 540
QEGTLVSYFY   SQRENRDLWK   FHDLNQDHNL   YLEQLLCSPT   PGFEGFAFDS   SGKVMLQFGK 600
KDSNEAGMRQ   IQKGILDFAD   EWIRHFGRDN   PMARISGRDA   YGPLALMLGN   KGYLKEIAKI 660
FHLNANVD 668
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8ZQU8-F1-model_v4 104 668 1 580 0.7249 0.8412
AF-Q0P8I2-F1-model_v4 69 668 54 869 0.5213 0.7009
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
WII09730.1 GT111 18 668 139 931 0.6555 0.7917
A0A975E9I4 GT2 30 668 226 994 0.6397 0.8045
WAJ24550.1 GT2 70 668 134 937 0.6336 0.853
AF-A0A078BDS9-F1-model_v4 GT2 46 668 147 1006 0.6285 0.8135
AF-U5MZQ8-F1-model_v4 GT2 70 668 132 946 0.6277 0.8485
U5MZQ8 GT2 70 668 132 946 0.6277 0.8485
AF-A0A1D7XMN6-F1-model_v4 GT2 71 668 133 945 0.6227 0.8428
A0A974WXG9 GT4 32 668 153 1019 0.6189 0.8079
UKD35065.1 GT111 69 668 98 814 0.6134 0.7992
A0A0U3BMS4 GT111 68 668 129 851 0.609 0.7997
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
WII09730.1 GT111 18 668 139 931 0.6555 0.7917
A0A975E9I4 GT2 30 668 226 994 0.6397 0.8045
WAJ24550.1 GT2 70 668 134 937 0.6336 0.853
A0A078BDS9 GT2 46 668 147 1006 0.6285 0.8135
U5MZQ8 GT2 70 668 132 946 0.6277 0.8485
A0A974WXG9 GT4 32 668 153 1019 0.6189 0.8079
UKD35065.1 GT111 69 668 98 814 0.6134 0.7992
A0A0U3BMS4 GT111 68 668 129 851 0.609 0.7997
A0A1H2DMX7 GT2 1 668 240 1528 0.5775 0.8046
AKJ53103.1 GT8 75 668 286 847 0.575 0.8012
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
8a0m-assembly1.cif.gz_B 92 668 242 845 0.5853 0.796
8a0m-assembly2.cif.gz_D 92 668 271 856 0.5661 0.7731
8a0m-assembly2.cif.gz_C 92 668 376 964 0.5578 0.7997
8a0m-assembly1.cif.gz_A 92 668 375 963 0.5573 0.7987
8a0c-assembly1.cif.gz_A 92 668 380 968 0.5565 0.7987
8a0c-assembly1.cif.gz_B 92 668 381 968 0.5546 0.7952
Download Full PDB Results
Structural Homologs - SwissProt