Cluster: HRGMv2_4317_CGC61
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4317
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4317_331 | HRGMv2_4317_331_4 | 3564 | 4514 | + | 3.A.1.1.10 |
| TC | HRGMv2_4317_331 | HRGMv2_4317_331_5 | 4530 | 5423 | + | 3.A.1.1.10 |
| STP | HRGMv2_4317_331 | HRGMv2_4317_331_6 | 5466 | 7148 | + | SBP_bac_1 |
| CAZyme | HRGMv2_4317_331 | HRGMv2_4317_331_7 | 7211 | 8239 | + | GH33 |
| CAZyme | HRGMv2_4317_331 | HRGMv2_4317_331_8 | 8267 | 11056 | + | GH106 |
Gene ID: HRGMv2_4317_331_4
Type: TC
Location: 3564 - 4514 (+)
Type: TC
Location: 3564 - 4514 (+)
Gene ID: HRGMv2_4317_331_5
Type: TC
Location: 4530 - 5423 (+)
Type: TC
Location: 4530 - 5423 (+)
Gene ID: HRGMv2_4317_331_6
Type: STP
Location: 5466 - 7148 (+)
Type: STP
Location: 5466 - 7148 (+)
Gene ID: HRGMv2_4317_331_7
Type: CAZyme
Location: 7211 - 8239 (+)
Type: CAZyme
Location: 7211 - 8239 (+)
Gene ID: HRGMv2_4317_331_8
Type: CAZyme
Location: 8267 - 11056 (+)
Type: CAZyme
Location: 8267 - 11056 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus sp017889125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.