dbCAN Logo

Cluster: HRGMv2_4317_CGC60

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4317_329 HRGMv2_4317_329_2 640 3285 + CBM48 | GH13_9
TC HRGMv2_4317_329 HRGMv2_4317_329_3 3403 4443 + 1.A.23.2.2
CAZyme HRGMv2_4317_329 HRGMv2_4317_329_4 4524 6788 - GT35
TF HRGMv2_4317_329 HRGMv2_4317_329_5 6930 7859 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_4317_329 HRGMv2_4317_329_6 7901 9487 + GH77
NULL(UNKNOWN) HRGMv2_4317_329 HRGMv2_4317_329_7 9595 10449 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_4317_329 HRGMv2_4317_329_8 10658 11212 + HD
CAZyme HRGMv2_4317_329 HRGMv2_4317_329_9 11246 12499 + CE4
Gene ID: HRGMv2_4317_329_2
Type: CAZyme
Location: 640 - 3285 (+)
Gene ID: HRGMv2_4317_329_3
Type: TC
Location: 3403 - 4443 (+)
Gene ID: HRGMv2_4317_329_4
Type: CAZyme
Location: 4524 - 6788 (-)
Gene ID: HRGMv2_4317_329_5
Type: TF
Location: 6930 - 7859 (+)
Gene ID: HRGMv2_4317_329_6
Type: CAZyme
Location: 7901 - 9487 (+)
Gene ID: HRGMv2_4317_329_7
Type:
Location: 9595 - 10449 (-)
Gene ID: HRGMv2_4317_329_8
Type: STP
Location: 10658 - 11212 (+)
Gene ID: HRGMv2_4317_329_9
Type: CAZyme
Location: 11246 - 12499 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List