Cluster: HRGMv2_4317_CGC58
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4317
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4317_313 | HRGMv2_4317_313_14 | 13164 | 13997 | - | CE4 |
| CAZyme | HRGMv2_4317_313 | HRGMv2_4317_313_15 | 13994 | 14935 | - | CE4 |
| TC | HRGMv2_4317_313 | HRGMv2_4317_313_16 | 15148 | 16095 | + | 3.A.1.3.15 |
| TC | HRGMv2_4317_313 | HRGMv2_4317_313_17 | 16148 | 16816 | + | 3.A.1.3.15 |
| TC | HRGMv2_4317_313 | HRGMv2_4317_313_18 | 16800 | 17522 | + | 3.A.1.3.15 |
Gene ID: HRGMv2_4317_313_14
Type: CAZyme
Location: 13164 - 13997 (-)
Type: CAZyme
Location: 13164 - 13997 (-)
Gene ID: HRGMv2_4317_313_15
Type: CAZyme
Location: 13994 - 14935 (-)
Type: CAZyme
Location: 13994 - 14935 (-)
Gene ID: HRGMv2_4317_313_16
Type: TC
Location: 15148 - 16095 (+)
Type: TC
Location: 15148 - 16095 (+)
Gene ID: HRGMv2_4317_313_17
Type: TC
Location: 16148 - 16816 (+)
Type: TC
Location: 16148 - 16816 (+)
Gene ID: HRGMv2_4317_313_18
Type: TC
Location: 16800 - 17522 (+)
Type: TC
Location: 16800 - 17522 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus sp017889125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.