Cluster: HRGMv2_4317_CGC56
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4317
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4317_303 | HRGMv2_4317_303_5 | 5511 | 7037 | + | GT2 |
| CAZyme | HRGMv2_4317_303 | HRGMv2_4317_303_6 | 7027 | 9297 | + | GT2 | GT2 |
| CAZyme | HRGMv2_4317_303 | HRGMv2_4317_303_7 | 9405 | 10412 | + | GT2 |
| TC | HRGMv2_4317_303 | HRGMv2_4317_303_8 | 10768 | 12180 | + | 9.B.18.1.1 |
Gene ID: HRGMv2_4317_303_5
Type: CAZyme
Location: 5511 - 7037 (+)
Type: CAZyme
Location: 5511 - 7037 (+)
Gene ID: HRGMv2_4317_303_6
Type: CAZyme
Location: 7027 - 9297 (+)
Type: CAZyme
Location: 7027 - 9297 (+)
Gene ID: HRGMv2_4317_303_7
Type: CAZyme
Location: 9405 - 10412 (+)
Type: CAZyme
Location: 9405 - 10412 (+)
Gene ID: HRGMv2_4317_303_8
Type: TC
Location: 10768 - 12180 (+)
Type: TC
Location: 10768 - 12180 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus sp017889125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.