Cluster: HRGMv2_4317_CGC55
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4317
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4317_298 | HRGMv2_4317_298_2 | 938 | 4264 | - | GH2 |
| TC | HRGMv2_4317_298 | HRGMv2_4317_298_3 | 4412 | 5245 | - | 3.A.1.1.18 |
| TC | HRGMv2_4317_298 | HRGMv2_4317_298_4 | 5246 | 6139 | - | 3.A.1.1.11 |
| STP | HRGMv2_4317_298 | HRGMv2_4317_298_5 | 6257 | 7630 | - | SBP_bac_1 |
| TF | HRGMv2_4317_298 | HRGMv2_4317_298_6 | 7774 | 9297 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_4317_298 | HRGMv2_4317_298_7 | 9272 | 11173 | - | 8.A.59.2.1 |
Gene ID: HRGMv2_4317_298_2
Type: CAZyme
Location: 938 - 4264 (-)
Type: CAZyme
Location: 938 - 4264 (-)
Gene ID: HRGMv2_4317_298_3
Type: TC
Location: 4412 - 5245 (-)
Type: TC
Location: 4412 - 5245 (-)
Gene ID: HRGMv2_4317_298_4
Type: TC
Location: 5246 - 6139 (-)
Type: TC
Location: 5246 - 6139 (-)
Gene ID: HRGMv2_4317_298_5
Type: STP
Location: 6257 - 7630 (-)
Type: STP
Location: 6257 - 7630 (-)
Gene ID: HRGMv2_4317_298_6
Type: TF
Location: 7774 - 9297 (-)
Type: TF
Location: 7774 - 9297 (-)
Gene ID: HRGMv2_4317_298_7
Type: TC
Location: 9272 - 11173 (-)
Type: TC
Location: 9272 - 11173 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus sp017889125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.