Cluster: HRGMv2_4317_CGC50
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4317
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4317_277 | HRGMv2_4317_277_35 | 40337 | 42109 | - | 3.A.1.32.3 |
| NULL(UNKNOWN) | HRGMv2_4317_277 | HRGMv2_4317_277_36 | 42144 | 43040 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4317_277 | HRGMv2_4317_277_37 | 43251 | 44084 | + | CE4 |
| pfam | HRGMv2_4317_277 | HRGMv2_4317_277_38 | 44098 | 44466 | - | Glutaredoxin | ArsC |
| pfam | HRGMv2_4317_277 | HRGMv2_4317_277_39 | 44497 | 46257 | - | Sulfatase |
| TC | HRGMv2_4317_277 | HRGMv2_4317_277_40 | 46522 | 47088 | - | 9.B.156.3.1 |
Gene ID: HRGMv2_4317_277_35
Type: TC
Location: 40337 - 42109 (-)
Type: TC
Location: 40337 - 42109 (-)
Gene ID: HRGMv2_4317_277_36
Type:
Location: 42144 - 43040 (-)
Type:
Location: 42144 - 43040 (-)
Gene ID: HRGMv2_4317_277_37
Type: CAZyme
Location: 43251 - 44084 (+)
Type: CAZyme
Location: 43251 - 44084 (+)
Gene ID: HRGMv2_4317_277_38
Type: pfam
Location: 44098 - 44466 (-)
Type: pfam
Location: 44098 - 44466 (-)
Gene ID: HRGMv2_4317_277_39
Type: pfam
Location: 44497 - 46257 (-)
Type: pfam
Location: 44497 - 46257 (-)
Gene ID: HRGMv2_4317_277_40
Type: TC
Location: 46522 - 47088 (-)
Type: TC
Location: 46522 - 47088 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus sp017889125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.