Cluster: HRGMv2_4317_CGC49
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4317
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4317_276 | HRGMv2_4317_276_2 | 708 | 1715 | + | 8.A.5.1.3 |
| pfam | HRGMv2_4317_276 | HRGMv2_4317_276_3 | 1708 | 1845 | + | Lact_bio_phlase |
| CAZyme | HRGMv2_4317_276 | HRGMv2_4317_276_4 | 1892 | 3922 | + | GH112 |
| TC | HRGMv2_4317_276 | HRGMv2_4317_276_5 | 4112 | 5149 | + | 8.A.5.1.6 |
Gene ID: HRGMv2_4317_276_2
Type: TC
Location: 708 - 1715 (+)
Type: TC
Location: 708 - 1715 (+)
Gene ID: HRGMv2_4317_276_3
Type: pfam
Location: 1708 - 1845 (+)
Type: pfam
Location: 1708 - 1845 (+)
Gene ID: HRGMv2_4317_276_4
Type: CAZyme
Location: 1892 - 3922 (+)
Type: CAZyme
Location: 1892 - 3922 (+)
Gene ID: HRGMv2_4317_276_5
Type: TC
Location: 4112 - 5149 (+)
Type: TC
Location: 4112 - 5149 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus sp017889125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.