Cluster: HRGMv2_4317_CGC48
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4317
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4317_273 | HRGMv2_4317_273_4 | 4566 | 6797 | + | GH2 |
| pfam | HRGMv2_4317_273 | HRGMv2_4317_273_5 | 6985 | 8337 | - | MatE | MatE |
| pfam | HRGMv2_4317_273 | HRGMv2_4317_273_6 | 8418 | 9458 | - | ADH_zinc_N | ADH_N | ADH_zinc_N_2 |
| TC | HRGMv2_4317_273 | HRGMv2_4317_273_7 | 9705 | 10157 | + | 1.A.22.1.8 |
Gene ID: HRGMv2_4317_273_4
Type: CAZyme
Location: 4566 - 6797 (+)
Type: CAZyme
Location: 4566 - 6797 (+)
Gene ID: HRGMv2_4317_273_5
Type: pfam
Location: 6985 - 8337 (-)
Type: pfam
Location: 6985 - 8337 (-)
Gene ID: HRGMv2_4317_273_6
Type: pfam
Location: 8418 - 9458 (-)
Type: pfam
Location: 8418 - 9458 (-)
Gene ID: HRGMv2_4317_273_7
Type: TC
Location: 9705 - 10157 (+)
Type: TC
Location: 9705 - 10157 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus sp017889125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.