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Cluster: HRGMv2_4317_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4317_267 HRGMv2_4317_267_9 5945 6595 + 9.A.32.1.1
pfam HRGMv2_4317_267 HRGMv2_4317_267_10 6685 7692 + DUF362
CAZyme HRGMv2_4317_267 HRGMv2_4317_267_11 7944 9143 + CE4
TF HRGMv2_4317_267 HRGMv2_4317_267_12 9290 10315 - HTH_3
STP HRGMv2_4317_267 HRGMv2_4317_267_13 10567 11889 + SBP_bac_1
TC HRGMv2_4317_267 HRGMv2_4317_267_14 11893 12792 + 3.A.1.1.20
TC HRGMv2_4317_267 HRGMv2_4317_267_15 12764 13615 + 3.A.1.1.20
TC HRGMv2_4317_267 HRGMv2_4317_267_16 13620 13913 + 3.A.1.1.20
TC HRGMv2_4317_267 HRGMv2_4317_267_17 13910 14740 + 3.A.1.1.46
CAZyme HRGMv2_4317_267 HRGMv2_4317_267_18 14737 16191 + GH32 | GH32
Gene ID: HRGMv2_4317_267_9
Type: TC
Location: 5945 - 6595 (+)
Gene ID: HRGMv2_4317_267_10
Type: pfam
Location: 6685 - 7692 (+)
Gene ID: HRGMv2_4317_267_11
Type: CAZyme
Location: 7944 - 9143 (+)
Gene ID: HRGMv2_4317_267_12
Type: TF
Location: 9290 - 10315 (-)
Gene ID: HRGMv2_4317_267_13
Type: STP
Location: 10567 - 11889 (+)
Gene ID: HRGMv2_4317_267_14
Type: TC
Location: 11893 - 12792 (+)
Gene ID: HRGMv2_4317_267_15
Type: TC
Location: 12764 - 13615 (+)
Gene ID: HRGMv2_4317_267_16
Type: TC
Location: 13620 - 13913 (+)
Gene ID: HRGMv2_4317_267_17
Type: TC
Location: 13910 - 14740 (+)
Gene ID: HRGMv2_4317_267_18
Type: CAZyme
Location: 14737 - 16191 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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