Cluster: HRGMv2_4317_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4317
- CGC Family ID: CGCFAM_05734
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4317_114 | HRGMv2_4317_114_3 | 1476 | 2390 | - | 2.A.79.1.5 |
| CAZyme | HRGMv2_4317_114 | HRGMv2_4317_114_4 | 2497 | 3930 | - | GH43_35 |
| CAZyme | HRGMv2_4317_114 | HRGMv2_4317_114_5 | 3927 | 5531 | - | CBM91 | GH43_11 |
| TC | HRGMv2_4317_114 | HRGMv2_4317_114_6 | 5653 | 7308 | - | 3.A.1.1.9 |
Gene ID: HRGMv2_4317_114_3
Type: TC
Location: 1476 - 2390 (-)
Type: TC
Location: 1476 - 2390 (-)
Gene ID: HRGMv2_4317_114_4
Type: CAZyme
Location: 2497 - 3930 (-)
Type: CAZyme
Location: 2497 - 3930 (-)
Gene ID: HRGMv2_4317_114_5
Type: CAZyme
Location: 3927 - 5531 (-)
Type: CAZyme
Location: 3927 - 5531 (-)
Gene ID: HRGMv2_4317_114_6
Type: TC
Location: 5653 - 7308 (-)
Type: TC
Location: 5653 - 7308 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus sp017889125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.