Cluster: HRGMv2_4317_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4317
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4317_113 | HRGMv2_4317_113_3 | 2041 | 2880 | + | CE1 |
| pfam | HRGMv2_4317_113 | HRGMv2_4317_113_4 | 2877 | 5357 | + | CoA_transf_3 | CoA_transf_3 |
| sulfatase | HRGMv2_4317_113 | HRGMv2_4317_113_5 | 5413 | 6201 | + | S1_4 |
| TC | HRGMv2_4317_113 | HRGMv2_4317_113_6 | 6814 | 8121 | + | 2.A.8.1.14 |
Gene ID: HRGMv2_4317_113_3
Type: CAZyme
Location: 2041 - 2880 (+)
Type: CAZyme
Location: 2041 - 2880 (+)
Gene ID: HRGMv2_4317_113_4
Type: pfam
Location: 2877 - 5357 (+)
Type: pfam
Location: 2877 - 5357 (+)
Gene ID: HRGMv2_4317_113_5
Type: sulfatase
Location: 5413 - 6201 (+)
Type: sulfatase
Location: 5413 - 6201 (+)
Gene ID: HRGMv2_4317_113_6
Type: TC
Location: 6814 - 8121 (+)
Type: TC
Location: 6814 - 8121 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus sp017889125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.