Cluster: HRGMv2_4317_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4317
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4317_3 | HRGMv2_4317_3_5 | 4610 | 5224 | + | 9.B.104.1.3 |
| pfam | HRGMv2_4317_3 | HRGMv2_4317_3_6 | 5253 | 5669 | + | HIT | DcpS_C |
| STP | HRGMv2_4317_3 | HRGMv2_4317_3_7 | 5692 | 6222 | + | Sigma70_r2 | Sigma70_r4_2 |
| CAZyme | HRGMv2_4317_3 | HRGMv2_4317_3_8 | 6297 | 7382 | - | GT28 |
Gene ID: HRGMv2_4317_3_5
Type: TC
Location: 4610 - 5224 (+)
Type: TC
Location: 4610 - 5224 (+)
Gene ID: HRGMv2_4317_3_6
Type: pfam
Location: 5253 - 5669 (+)
Type: pfam
Location: 5253 - 5669 (+)
Gene ID: HRGMv2_4317_3_7
Type: STP
Location: 5692 - 6222 (+)
Type: STP
Location: 5692 - 6222 (+)
Gene ID: HRGMv2_4317_3_8
Type: CAZyme
Location: 6297 - 7382 (-)
Type: CAZyme
Location: 6297 - 7382 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus sp017889125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.