dbCAN Logo

Cluster: HRGMv2_4314_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4314_10 HRGMv2_4314_10_88 93804 95258 - 9.A.11.1.2
pfam HRGMv2_4314_10 HRGMv2_4314_10_89 95332 96228 - Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_9
CAZyme HRGMv2_4314_10 HRGMv2_4314_10_90 96397 98553 - GH112
CAZyme HRGMv2_4314_10 HRGMv2_4314_10_91 98589 99641 - GH105
NULL(UNKNOWN) HRGMv2_4314_10 HRGMv2_4314_10_92 99798 101486 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4314_10 HRGMv2_4314_10_93 101519 102415 - 3.A.1.1.29
TC HRGMv2_4314_10 HRGMv2_4314_10_94 102431 103357 - 3.A.1.1.10
Gene ID: HRGMv2_4314_10_88
Type: TC
Location: 93804 - 95258 (-)
Gene ID: HRGMv2_4314_10_89
Type: pfam
Location: 95332 - 96228 (-)
Gene ID: HRGMv2_4314_10_90
Type: CAZyme
Location: 96397 - 98553 (-)
Gene ID: HRGMv2_4314_10_91
Type: CAZyme
Location: 98589 - 99641 (-)
Gene ID: HRGMv2_4314_10_92
Type:
Location: 99798 - 101486 (-)
Gene ID: HRGMv2_4314_10_93
Type: TC
Location: 101519 - 102415 (-)
Gene ID: HRGMv2_4314_10_94
Type: TC
Location: 102431 - 103357 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List