PROTEIN: HRGMv2_4314_10_92
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Protein File & Metadata
Source:
HRGMv2_4314_10_92.pdb
Genome ID:
Protein ID:
HRGMv2_4314_10_92
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Protein Sequence
MKKNVLSKVT AVALALIMTA SIVTGCGRSS SDKKNDNNAK DTTANEGVTD EKDSGQEEGT 60 NNEGAYEDYS KGFPEKVTIQ IPVYDRAFEG WNVTDNYYTR WIQSEFGDKY NVNVEYVAIG 120 RTTEVQDYMQ MIAAGSAPDI IMHYDMPQAV NYYNEGAIQD IDLKEIKYYA PDYYNKLAGT 180 IEKYGKLDGK SAFFFAQRDA IYYNFVTLIR QDWLDAVGKS MPTNRAELEE VARAWKDAGL 240 GTLGETLITK SFTYEYPFID KNTTVEEFAK YLDLNVAPFT WDATKAYLQT LNKEYNEGLI 300 DPEFYLNKED VDTKADFVAG NTGTYSFYIS STTDVISSLV ANNPDAKVSV MNSGAGSPNG 360 TSYYYQYPGY GMVMGINSDT TKEQRAAIWM LLNWMTQDEN LFFLQNGVEG QNYILNADGI 420 AEPVADFSGE SKLSNNNNKD YWCLVEEVAN YGDSDLNLKA NMKILAPVGY ENLIQDSFDY 480 AKQNEQYGLI TPIFTKTVES VSEYSADLSA MWQEFYVDCI TCSPDEFESK YEAYCKEYLE 540 NGYQEILDEK QSLLDSGDYI AE 562
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CPC5-F1-model_v4 | 71 | 546 | 30 | 423 | 0.6288 |
0.779 |
| AF-Q8DRJ6-F1-model_v4 | 1 | 562 | 6 | 514 | 0.6266 |
0.6786 |
| AF-Q8DNU8-F1-model_v4 | 71 | 550 | 35 | 440 | 0.618 |
0.7601 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 64 | 559 | 37 | 506 | 0.7335 |
0.8415 |
| AF-A0A1Q2TKJ3-F1-model_v4 | GH49 | 2 | 550 | 2 | 797 | 0.5043 |
0.6116 |
| AF-A0A7U1BNH7-F1-model_v4 | GH10 | 72 | 557 | 26 | 745 | 0.495 |
0.6512 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 64 | 559 | 37 | 506 | 0.7335 |
0.8415 |
| A0A1Q2TKJ3 | GH49 | 2 | 550 | 2 | 797 | 0.5043 |
0.6116 |
| A0A7U1BNH7 | GH10 | 72 | 557 | 26 | 745 | 0.495 |
0.6512 |
| UJP10085.1 | GH154 | 16 | 523 | 403 | 1167 | 0.3682 |
0.5774 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5xs8-assembly1.cif.gz_A | 76 | 560 | 1 | 474 | 0.7274 |
0.8044 |
| 5h6u-assembly1.cif.gz_A | 69 | 561 | 1 | 487 | 0.7224 |
0.791 |
| 6jhx-assembly2.cif.gz_B | 69 | 557 | 4 | 483 | 0.7218 |
0.7977 |
| 3vlw-assembly2.cif.gz_B | 69 | 561 | 2 | 489 | 0.7217 |
0.7909 |
| 4tqu-assembly1.cif.gz_Q | 69 | 562 | 4 | 492 | 0.7178 |
0.7874 |
| 5g62-assembly2.cif.gz_B | 76 | 562 | 1 | 491 | 0.6994 |
0.7691 |
| 6fth-assembly1.cif.gz_A | 71 | 562 | 1 | 496 | 0.6972 |
0.7629 |
| 3omb-assembly1.cif.gz_A | 67 | 561 | 1 | 503 | 0.689 |
0.7552 |
| 5suo-assembly1.cif.gz_A | 72 | 562 | 1 | 451 | 0.6677 |
0.7578 |
| 5f7v-assembly1.cif.gz_A | 75 | 549 | 1 | 388 | 0.6676 |
0.8034 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2YKZ9-F1-model_v4 | 72 | 549 | 21 | 411 | 0.6604 |
0.8107 |
| AF-Q578M8-F1-model_v4 | 72 | 549 | 21 | 411 | 0.6596 |
0.8096 |
| AF-Q8FVS7-F1-model_v4 | 72 | 549 | 21 | 411 | 0.659 |
0.8092 |
| AF-O32156-F1-model_v4 | 73 | 552 | 28 | 422 | 0.6354 |
0.7834 |
| AF-P76042-F1-model_v4 | 70 | 546 | 23 | 430 | 0.6091 |
0.7371 |
| AF-Q9Z3R5-F1-model_v4 | 69 | 549 | 50 | 458 | 0.5975 |
0.7429 |
| AF-Q9V297-F1-model_v4 | 40 | 549 | 1 | 453 | 0.5928 |
0.673 |
| AF-D4GP35-F1-model_v4 | 69 | 548 | 63 | 459 | 0.5902 |
0.7526 |