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Cluster: HRGMv2_4314_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4314_6 HRGMv2_4314_6_63 85564 86259 + 3.A.1.128.3
pfam HRGMv2_4314_6 HRGMv2_4314_6_64 86259 87824 + ABC_export
TC HRGMv2_4314_6 HRGMv2_4314_6_65 87995 88669 + 9.B.18.1.2
pfam HRGMv2_4314_6 HRGMv2_4314_6_66 88691 89494 + 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
CAZyme HRGMv2_4314_6 HRGMv2_4314_6_67 89899 91089 + GT4
CAZyme HRGMv2_4314_6 HRGMv2_4314_6_68 91049 91846 + GT2
NULL(UNKNOWN) HRGMv2_4314_6 HRGMv2_4314_6_69 91816 93198 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4314_6 HRGMv2_4314_6_70 93219 94658 + ABC2_membrane
TC HRGMv2_4314_6 HRGMv2_4314_6_71 94668 95399 + 3.A.1.103.1
Gene ID: HRGMv2_4314_6_63
Type: TC
Location: 85564 - 86259 (+)
Gene ID: HRGMv2_4314_6_64
Type: pfam
Location: 86259 - 87824 (+)
Gene ID: HRGMv2_4314_6_65
Type: TC
Location: 87995 - 88669 (+)
Gene ID: HRGMv2_4314_6_66
Type: pfam
Location: 88691 - 89494 (+)
Gene ID: HRGMv2_4314_6_67
Type: CAZyme
Location: 89899 - 91089 (+)
Gene ID: HRGMv2_4314_6_68
Type: CAZyme
Location: 91049 - 91846 (+)
Gene ID: HRGMv2_4314_6_69
Type:
Location: 91816 - 93198 (+)
Gene ID: HRGMv2_4314_6_70
Type: pfam
Location: 93219 - 94658 (+)
Gene ID: HRGMv2_4314_6_71
Type: TC
Location: 94668 - 95399 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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