PROTEIN: HRGMv2_4314_6_69
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Protein File & Metadata
Source:
HRGMv2_4314_6_69.pdb
Genome ID:
Protein ID:
HRGMv2_4314_6_69
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Protein Sequence
MDNKIIKAEL NMNYYDRYLN VLKKSGIEMF NASIETMNNS KGNDDVVYNV SATMTGPLIF 60 LYISWVIEEA VKNKIKRLYF LSRDGYIMKK VADVIVKHQH INIECRYLYG SRMAWRVPQY 120 HIQGEECLDQ ICINGINVNL KKIMERGLLT EKEQEKVCNE LNINEIEFNR VLNPYEIIDY 180 KDKLKENTSF LKFVVEHSKQ AYGSTIGYLE QEKLFDNVKY AIVDSGWTGT LQRSLQNLLD 240 SVEKRGGITG YYFGMYNIPE DLDEKNFNTF LFNKNSGLLE KINFNNNLFE CLCCAENGMT 300 TGYKESGGNY IPIFSSSENL NINVWPINNQ IETVCEYAIN ASKNLNGQIL DSNKSRKIAF 360 KLCKKSMMNP SKPEVDVYGK FLFSDDITEN NVYPLAIPMT KTDLKKNNLL NIVYNKLFVK 420 GQGAPIKKSA WIEGTITKSN VKNAWWYKLN AKIIRLILYV 460
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 1 | 445 | 1 | 628 | 0.6596 |
0.7956 |
| AF-Q0P8I2-F1-model_v4 | 1 | 460 | 466 | 979 | 0.4881 |
0.6774 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A974WXG9 | GT4 | 1 | 454 | 440 | 1078 | 0.5932 |
0.8496 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 1 | 460 | 410 | 1067 | 0.5891 |
0.8261 |
| AF-W0DNV7-F1-model_v4 | GT2 | 1 | 460 | 424 | 1089 | 0.5886 |
0.8309 |
| A0A1I7GMF6 | GT2 | 1 | 460 | 426 | 1083 | 0.5854 |
0.8248 |
| AF-A0A0U5F758-F1-model_v4 | GT2 | 42 | 454 | 8 | 403 | 0.554 |
0.7599 |
| A0A9J7AXY3 | GT2 | 15 | 460 | 6 | 399 | 0.5432 |
0.7856 |
| V4JBH5 | GT2 | 11 | 457 | 1 | 398 | 0.5416 |
0.785 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 36 | 457 | 2 | 405 | 0.5411 |
0.7843 |
| QRK05458.1 | GT4 | 1 | 460 | 126 | 985 | 0.5409 |
0.7821 |
| AF-A0A1D7XMN6-F1-model_v4 | GT2 | 1 | 457 | 348 | 969 | 0.5403 |
0.755 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A974WXG9 | GT4 | 1 | 454 | 440 | 1078 | 0.5932 |
0.8496 |
| A0A2I6S8V6 | GT2 | 1 | 460 | 410 | 1067 | 0.5891 |
0.8261 |
| A0A1I7GMF6 | GT2 | 1 | 460 | 426 | 1083 | 0.5854 |
0.8248 |
| A0A0U5F758 | GT2 | 42 | 454 | 8 | 403 | 0.554 |
0.7599 |
| A0A9J7AXY3 | GT2 | 15 | 460 | 6 | 399 | 0.5432 |
0.7856 |
| V4JBH5 | GT2 | 11 | 457 | 1 | 398 | 0.5416 |
0.785 |
| A0A0H3KC95 | GT2 | 36 | 457 | 2 | 405 | 0.5411 |
0.7843 |
| QRK05458.1 | GT4 | 1 | 460 | 126 | 985 | 0.5409 |
0.7821 |
| A0A975E9I4 | GT2 | 1 | 449 | 435 | 1004 | 0.5395 |
0.7601 |
| A0A0U3BMS4 | GT111 | 1 | 425 | 318 | 929 | 0.5381 |
0.7882 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 1 | 381 | 222 | 591 | 0.5767 |
0.8025 |
| 8a0m-assembly1.cif.gz_B | 1 | 452 | 349 | 875 | 0.5547 |
0.7664 |
| 8a0c-assembly1.cif.gz_A | 1 | 453 | 487 | 1028 | 0.5478 |
0.7891 |
| 8a0m-assembly2.cif.gz_C | 1 | 453 | 483 | 1024 | 0.5474 |
0.788 |
| 8a0m-assembly1.cif.gz_A | 1 | 453 | 482 | 1023 | 0.5469 |
0.787 |
| 8a0c-assembly1.cif.gz_B | 1 | 450 | 487 | 1025 | 0.5414 |
0.7844 |
| 8a0m-assembly2.cif.gz_D | 1 | 452 | 378 | 886 | 0.5243 |
0.7269 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.