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Cluster: HRGMv2_4313_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4313_8 HRGMv2_4313_8_32 29769 31733 + GH13_11
pfam HRGMv2_4313_8 HRGMv2_4313_8_33 31747 32403 + DUF5662
pfam HRGMv2_4313_8 HRGMv2_4313_8_34 32469 33365 - PseudoU_synth_2
TC HRGMv2_4313_8 HRGMv2_4313_8_35 33371 34549 - 3.A.1.11.7
TC HRGMv2_4313_8 HRGMv2_4313_8_36 34568 35386 - 3.A.1.11.1
TC HRGMv2_4313_8 HRGMv2_4313_8_37 35386 36204 - 3.A.1.11.8
TC HRGMv2_4313_8 HRGMv2_4313_8_38 36197 37270 - 3.A.1.11.8
Gene ID: HRGMv2_4313_8_32
Type: CAZyme
Location: 29769 - 31733 (+)
Gene ID: HRGMv2_4313_8_33
Type: pfam
Location: 31747 - 32403 (+)
Gene ID: HRGMv2_4313_8_34
Type: pfam
Location: 32469 - 33365 (-)
Gene ID: HRGMv2_4313_8_35
Type: TC
Location: 33371 - 34549 (-)
Gene ID: HRGMv2_4313_8_36
Type: TC
Location: 34568 - 35386 (-)
Gene ID: HRGMv2_4313_8_37
Type: TC
Location: 35386 - 36204 (-)
Gene ID: HRGMv2_4313_8_38
Type: TC
Location: 36197 - 37270 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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