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Cluster: HRGMv2_4313_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4313_7 HRGMv2_4313_7_21 18613 19611 - GT4
pfam HRGMv2_4313_7 HRGMv2_4313_7_22 19629 20210 - VTT_dom
CAZyme HRGMv2_4313_7 HRGMv2_4313_7_23 20207 21385 - GT4
peptidase HRGMv2_4313_7 HRGMv2_4313_7_24 21762 22580 - S09.UPW
pfam HRGMv2_4313_7 HRGMv2_4313_7_25 22682 23305 - PhoU_div
TC HRGMv2_4313_7 HRGMv2_4313_7_26 23403 24455 - 2.A.20.1.5
STP HRGMv2_4313_7 HRGMv2_4313_7_27 24478 25152 - TrkA_C
TC HRGMv2_4313_7 HRGMv2_4313_7_28 25218 26522 - 2.A.38.4.1
NULL(UNKNOWN) HRGMv2_4313_7 HRGMv2_4313_7_29 26559 26990 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4313_7 HRGMv2_4313_7_30 27427 29514 + 3.A.10.1.5
Gene ID: HRGMv2_4313_7_21
Type: CAZyme
Location: 18613 - 19611 (-)
Gene ID: HRGMv2_4313_7_22
Type: pfam
Location: 19629 - 20210 (-)
Gene ID: HRGMv2_4313_7_23
Type: CAZyme
Location: 20207 - 21385 (-)
Gene ID: HRGMv2_4313_7_24
Type: peptidase
Location: 21762 - 22580 (-)
Gene ID: HRGMv2_4313_7_25
Type: pfam
Location: 22682 - 23305 (-)
Gene ID: HRGMv2_4313_7_26
Type: TC
Location: 23403 - 24455 (-)
Gene ID: HRGMv2_4313_7_27
Type: STP
Location: 24478 - 25152 (-)
Gene ID: HRGMv2_4313_7_28
Type: TC
Location: 25218 - 26522 (-)
Gene ID: HRGMv2_4313_7_29
Type:
Location: 26559 - 26990 (-)
Gene ID: HRGMv2_4313_7_30
Type: TC
Location: 27427 - 29514 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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