Cluster: HRGMv2_4313_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4313
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4313_89 | HRGMv2_4313_89_4 | 3193 | 4743 | + | 2.A.66.2.14 |
| TC | HRGMv2_4313_89 | HRGMv2_4313_89_5 | 4891 | 5841 | + | 2.A.28.2.4 |
| CAZyme | HRGMv2_4313_89 | HRGMv2_4313_89_6 | 6123 | 7568 | - | GT5 |
Gene ID: HRGMv2_4313_89_4
Type: TC
Location: 3193 - 4743 (+)
Type: TC
Location: 3193 - 4743 (+)
Gene ID: HRGMv2_4313_89_5
Type: TC
Location: 4891 - 5841 (+)
Type: TC
Location: 4891 - 5841 (+)
Gene ID: HRGMv2_4313_89_6
Type: CAZyme
Location: 6123 - 7568 (-)
Type: CAZyme
Location: 6123 - 7568 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Merdiplasma
Species
Merdiplasma excrementigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.