Cluster: HRGMv2_4313_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4313
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4313_75 | HRGMv2_4313_75_7 | 5913 | 6860 | - | GT2 |
| pfam | HRGMv2_4313_75 | HRGMv2_4313_75_8 | 6862 | 8256 | - | LytR_cpsA_psr |
| TC | HRGMv2_4313_75 | HRGMv2_4313_75_9 | 8293 | 9693 | - | 9.B.18.1.1 |
| CAZyme | HRGMv2_4313_75 | HRGMv2_4313_75_10 | 9735 | 10712 | - | GT2 |
| CAZyme | HRGMv2_4313_75 | HRGMv2_4313_75_11 | 10716 | 11639 | - | GT2 |
Gene ID: HRGMv2_4313_75_7
Type: CAZyme
Location: 5913 - 6860 (-)
Type: CAZyme
Location: 5913 - 6860 (-)
Gene ID: HRGMv2_4313_75_8
Type: pfam
Location: 6862 - 8256 (-)
Type: pfam
Location: 6862 - 8256 (-)
Gene ID: HRGMv2_4313_75_9
Type: TC
Location: 8293 - 9693 (-)
Type: TC
Location: 8293 - 9693 (-)
Gene ID: HRGMv2_4313_75_10
Type: CAZyme
Location: 9735 - 10712 (-)
Type: CAZyme
Location: 9735 - 10712 (-)
Gene ID: HRGMv2_4313_75_11
Type: CAZyme
Location: 10716 - 11639 (-)
Type: CAZyme
Location: 10716 - 11639 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Merdiplasma
Species
Merdiplasma excrementigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.