Cluster: HRGMv2_4313_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4313
- CGC Family ID: CGCFAM_00007
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4313_72 | HRGMv2_4313_72_1 | 3 | 2015 | - | GT2 |
| CAZyme | HRGMv2_4313_72 | HRGMv2_4313_72_2 | 2063 | 3217 | - | GT2 |
| pfam | HRGMv2_4313_72 | HRGMv2_4313_72_3 | 3232 | 4416 | - | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| TC | HRGMv2_4313_72 | HRGMv2_4313_72_4 | 4418 | 6337 | - | 3.A.1.103.1 |
| TC | HRGMv2_4313_72 | HRGMv2_4313_72_5 | 6360 | 7148 | - | 3.A.1.103.4 |
Gene ID: HRGMv2_4313_72_1
Type: CAZyme
Location: 3 - 2015 (-)
Type: CAZyme
Location: 3 - 2015 (-)
Gene ID: HRGMv2_4313_72_2
Type: CAZyme
Location: 2063 - 3217 (-)
Type: CAZyme
Location: 2063 - 3217 (-)
Gene ID: HRGMv2_4313_72_3
Type: pfam
Location: 3232 - 4416 (-)
Type: pfam
Location: 3232 - 4416 (-)
Gene ID: HRGMv2_4313_72_4
Type: TC
Location: 4418 - 6337 (-)
Type: TC
Location: 4418 - 6337 (-)
Gene ID: HRGMv2_4313_72_5
Type: TC
Location: 6360 - 7148 (-)
Type: TC
Location: 6360 - 7148 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Merdiplasma
Species
Merdiplasma excrementigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.