Cluster: HRGMv2_4313_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4313
- CGC Family ID: CGCFAM_00027
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4313_61 | HRGMv2_4313_61_8 | 9345 | 11246 | + | 4.A.1.2.11 |
| CAZyme | HRGMv2_4313_61 | HRGMv2_4313_61_9 | 11269 | 12705 | + | GH1 |
| TC | HRGMv2_4313_61 | HRGMv2_4313_61_10 | 12853 | 14175 | + | 2.A.25.1.3 |
Gene ID: HRGMv2_4313_61_8
Type: TC
Location: 9345 - 11246 (+)
Type: TC
Location: 9345 - 11246 (+)
Gene ID: HRGMv2_4313_61_9
Type: CAZyme
Location: 11269 - 12705 (+)
Type: CAZyme
Location: 11269 - 12705 (+)
Gene ID: HRGMv2_4313_61_10
Type: TC
Location: 12853 - 14175 (+)
Type: TC
Location: 12853 - 14175 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Merdiplasma
Species
Merdiplasma excrementigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.