Cluster: HRGMv2_4313_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4313
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4313_25 | HRGMv2_4313_25_27 | 23528 | 24280 | - | 1.A.13.5.1 |
| TF | HRGMv2_4313_25 | HRGMv2_4313_25_28 | 24631 | 25440 | + | HTH_AraC | HTH_AraC |
| pfam | HRGMv2_4313_25 | HRGMv2_4313_25_29 | 25448 | 26716 | - | URO-D |
| CAZyme | HRGMv2_4313_25 | HRGMv2_4313_25_30 | 26830 | 28503 | - | GH13_31 |
Gene ID: HRGMv2_4313_25_27
Type: TC
Location: 23528 - 24280 (-)
Type: TC
Location: 23528 - 24280 (-)
Gene ID: HRGMv2_4313_25_28
Type: TF
Location: 24631 - 25440 (+)
Type: TF
Location: 24631 - 25440 (+)
Gene ID: HRGMv2_4313_25_29
Type: pfam
Location: 25448 - 26716 (-)
Type: pfam
Location: 25448 - 26716 (-)
Gene ID: HRGMv2_4313_25_30
Type: CAZyme
Location: 26830 - 28503 (-)
Type: CAZyme
Location: 26830 - 28503 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Merdiplasma
Species
Merdiplasma excrementigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.