Cluster: HRGMv2_4313_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4313
- CGC Family ID: CGCFAM_00149
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4313_1 | HRGMv2_4313_1_44 | 40346 | 40972 | + | 9.B.104.1.3 |
| pfam | HRGMv2_4313_1 | HRGMv2_4313_1_45 | 41059 | 41472 | + | HIT | DcpS_C |
| pfam | HRGMv2_4313_1 | HRGMv2_4313_1_46 | 41486 | 42286 | + | S6PP | Hydrolase_3 |
| CAZyme | HRGMv2_4313_1 | HRGMv2_4313_1_47 | 42434 | 43507 | - | GT28 |
Gene ID: HRGMv2_4313_1_44
Type: TC
Location: 40346 - 40972 (+)
Type: TC
Location: 40346 - 40972 (+)
Gene ID: HRGMv2_4313_1_45
Type: pfam
Location: 41059 - 41472 (+)
Type: pfam
Location: 41059 - 41472 (+)
Gene ID: HRGMv2_4313_1_46
Type: pfam
Location: 41486 - 42286 (+)
Type: pfam
Location: 41486 - 42286 (+)
Gene ID: HRGMv2_4313_1_47
Type: CAZyme
Location: 42434 - 43507 (-)
Type: CAZyme
Location: 42434 - 43507 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Merdiplasma
Species
Merdiplasma excrementigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.