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Cluster: HRGMv2_4310_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4310_5 HRGMv2_4310_5_36 35163 36095 - GT2
NULL(UNKNOWN) HRGMv2_4310_5 HRGMv2_4310_5_37 36085 37401 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4310_5 HRGMv2_4310_5_38 37406 38095 - GT2
CAZyme HRGMv2_4310_5 HRGMv2_4310_5_39 38099 39028 - GT2
CAZyme HRGMv2_4310_5 HRGMv2_4310_5_40 39021 40037 - GT8
peptidase HRGMv2_4310_5 HRGMv2_4310_5_41 40182 41645 + C82.UNA
pfam HRGMv2_4310_5 HRGMv2_4310_5_42 41740 42618 - LicD
TC HRGMv2_4310_5 HRGMv2_4310_5_43 42757 44232 - 2.A.66.2.16
CAZyme HRGMv2_4310_5 HRGMv2_4310_5_44 44371 45294 + GT2
Gene ID: HRGMv2_4310_5_36
Type: CAZyme
Location: 35163 - 36095 (-)
Gene ID: HRGMv2_4310_5_37
Type:
Location: 36085 - 37401 (-)
Gene ID: HRGMv2_4310_5_38
Type: CAZyme
Location: 37406 - 38095 (-)
Gene ID: HRGMv2_4310_5_39
Type: CAZyme
Location: 38099 - 39028 (-)
Gene ID: HRGMv2_4310_5_40
Type: CAZyme
Location: 39021 - 40037 (-)
Gene ID: HRGMv2_4310_5_41
Type: peptidase
Location: 40182 - 41645 (+)
Gene ID: HRGMv2_4310_5_42
Type: pfam
Location: 41740 - 42618 (-)
Gene ID: HRGMv2_4310_5_43
Type: TC
Location: 42757 - 44232 (-)
Gene ID: HRGMv2_4310_5_44
Type: CAZyme
Location: 44371 - 45294 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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