Cluster: HRGMv2_4310_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4310
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4310_75 | HRGMv2_4310_75_1 | 3 | 524 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_4310_75 | HRGMv2_4310_75_2 | 638 | 868 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4310_75 | HRGMv2_4310_75_3 | 948 | 1439 | - | S6PP | Hydrolase_3 |
| TC | HRGMv2_4310_75 | HRGMv2_4310_75_4 | 1423 | 2040 | - | 9.B.20.1.4 |
| TC | HRGMv2_4310_75 | HRGMv2_4310_75_5 | 2144 | 3883 | - | 3.A.1.11.5 |
| TC | HRGMv2_4310_75 | HRGMv2_4310_75_6 | 3897 | 4898 | - | 3.A.1.1.16 |
Gene ID: HRGMv2_4310_75_1
Type: CAZyme
Location: 3 - 524 (-)
Type: CAZyme
Location: 3 - 524 (-)
Gene ID: HRGMv2_4310_75_2
Type:
Location: 638 - 868 (-)
Type:
Location: 638 - 868 (-)
Gene ID: HRGMv2_4310_75_3
Type: pfam
Location: 948 - 1439 (-)
Type: pfam
Location: 948 - 1439 (-)
Gene ID: HRGMv2_4310_75_4
Type: TC
Location: 1423 - 2040 (-)
Type: TC
Location: 1423 - 2040 (-)
Gene ID: HRGMv2_4310_75_5
Type: TC
Location: 2144 - 3883 (-)
Type: TC
Location: 2144 - 3883 (-)
Gene ID: HRGMv2_4310_75_6
Type: TC
Location: 3897 - 4898 (-)
Type: TC
Location: 3897 - 4898 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_A
Species
Lachnoclostridium_A avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.