Cluster: HRGMv2_4310_CGC27
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4310
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4310_74 | HRGMv2_4310_74_1 | 1 | 675 | - | 2.A.66.1.7 |
| NULL(UNKNOWN) | HRGMv2_4310_74 | HRGMv2_4310_74_2 | 849 | 1172 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_4310_74 | HRGMv2_4310_74_3 | 1175 | 1366 | + | HTH_3 |
| CAZyme | HRGMv2_4310_74 | HRGMv2_4310_74_4 | 1464 | 6230 | - | CE8 |
| CAZyme | HRGMv2_4310_74 | HRGMv2_4310_74_5 | 6486 | 7868 | - | GT2 |
Gene ID: HRGMv2_4310_74_1
Type: TC
Location: 1 - 675 (-)
Type: TC
Location: 1 - 675 (-)
Gene ID: HRGMv2_4310_74_2
Type:
Location: 849 - 1172 (+)
Type:
Location: 849 - 1172 (+)
Gene ID: HRGMv2_4310_74_3
Type: TF
Location: 1175 - 1366 (+)
Type: TF
Location: 1175 - 1366 (+)
Gene ID: HRGMv2_4310_74_4
Type: CAZyme
Location: 1464 - 6230 (-)
Type: CAZyme
Location: 1464 - 6230 (-)
Gene ID: HRGMv2_4310_74_5
Type: CAZyme
Location: 6486 - 7868 (-)
Type: CAZyme
Location: 6486 - 7868 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_A
Species
Lachnoclostridium_A avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.