Cluster: HRGMv2_4310_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4310
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4310_62 | HRGMv2_4310_62_10 | 10220 | 11686 | - | GH1 |
| CAZyme | HRGMv2_4310_62 | HRGMv2_4310_62_11 | 11708 | 13120 | - | GH1 |
| TC | HRGMv2_4310_62 | HRGMv2_4310_62_12 | 13559 | 15529 | + | 4.A.1.2.6 |
| CAZyme | HRGMv2_4310_62 | HRGMv2_4310_62_13 | 15657 | 16610 | + | GH1 |
Gene ID: HRGMv2_4310_62_10
Type: CAZyme
Location: 10220 - 11686 (-)
Type: CAZyme
Location: 10220 - 11686 (-)
Gene ID: HRGMv2_4310_62_11
Type: CAZyme
Location: 11708 - 13120 (-)
Type: CAZyme
Location: 11708 - 13120 (-)
Gene ID: HRGMv2_4310_62_12
Type: TC
Location: 13559 - 15529 (+)
Type: TC
Location: 13559 - 15529 (+)
Gene ID: HRGMv2_4310_62_13
Type: CAZyme
Location: 15657 - 16610 (+)
Type: CAZyme
Location: 15657 - 16610 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_A
Species
Lachnoclostridium_A avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.