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Cluster: HRGMv2_4310_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4310_46 HRGMv2_4310_46_3 2092 3384 + 3.A.1.1.44
TC HRGMv2_4310_46 HRGMv2_4310_46_4 3397 4293 + 3.A.1.1.25
TC HRGMv2_4310_46 HRGMv2_4310_46_5 4306 5142 + 3.A.1.1.34
CAZyme HRGMv2_4310_46 HRGMv2_4310_46_6 5175 7370 + GH36
pfam HRGMv2_4310_46 HRGMv2_4310_46_7 7406 7870 + DUF6106
CAZyme HRGMv2_4310_46 HRGMv2_4310_46_8 7876 9720 + GH13_4
TC HRGMv2_4310_46 HRGMv2_4310_46_9 9762 10874 + 3.A.1.1.26
Gene ID: HRGMv2_4310_46_3
Type: TC
Location: 2092 - 3384 (+)
Gene ID: HRGMv2_4310_46_4
Type: TC
Location: 3397 - 4293 (+)
Gene ID: HRGMv2_4310_46_5
Type: TC
Location: 4306 - 5142 (+)
Gene ID: HRGMv2_4310_46_6
Type: CAZyme
Location: 5175 - 7370 (+)
Gene ID: HRGMv2_4310_46_7
Type: pfam
Location: 7406 - 7870 (+)
Gene ID: HRGMv2_4310_46_8
Type: CAZyme
Location: 7876 - 9720 (+)
Gene ID: HRGMv2_4310_46_9
Type: TC
Location: 9762 - 10874 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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