Cluster: HRGMv2_4310_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4310
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4310_22 | HRGMv2_4310_22_8 | 5526 | 9134 | - | 4.C.1.1.4 |
| peptidase | HRGMv2_4310_22 | HRGMv2_4310_22_9 | 9404 | 10681 | - | S55.001 |
| STP | HRGMv2_4310_22 | HRGMv2_4310_22_10 | 11040 | 11849 | + | Response_reg | Spo0A_C |
| CAZyme | HRGMv2_4310_22 | HRGMv2_4310_22_11 | 11988 | 13433 | + | GT5 |
Gene ID: HRGMv2_4310_22_8
Type: TC
Location: 5526 - 9134 (-)
Type: TC
Location: 5526 - 9134 (-)
Gene ID: HRGMv2_4310_22_9
Type: peptidase
Location: 9404 - 10681 (-)
Type: peptidase
Location: 9404 - 10681 (-)
Gene ID: HRGMv2_4310_22_10
Type: STP
Location: 11040 - 11849 (+)
Type: STP
Location: 11040 - 11849 (+)
Gene ID: HRGMv2_4310_22_11
Type: CAZyme
Location: 11988 - 13433 (+)
Type: CAZyme
Location: 11988 - 13433 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_A
Species
Lachnoclostridium_A avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.