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Cluster: HRGMv2_4309_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4309_15 HRGMv2_4309_15_30 46777 47631 + GT2
NULL(UNKNOWN) HRGMv2_4309_15 HRGMv2_4309_15_31 47618 48886 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4309_15 HRGMv2_4309_15_32 48887 49672 + ABC2_membrane
TC HRGMv2_4309_15 HRGMv2_4309_15_33 49702 50490 + 3.A.1.103.1
pfam HRGMv2_4309_15 HRGMv2_4309_15_34 50509 52518 + Hydrolase
TC HRGMv2_4309_15 HRGMv2_4309_15_35 52694 53941 + 3.A.1.1.22
TC HRGMv2_4309_15 HRGMv2_4309_15_36 53942 54853 + 3.A.1.1.7
TC HRGMv2_4309_15 HRGMv2_4309_15_37 54854 55684 + 3.A.1.1.49
NULL(UNKNOWN) HRGMv2_4309_15 HRGMv2_4309_15_38 55692 56975 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4309_15 HRGMv2_4309_15_39 56979 58709 + 9.B.33.1.1
Gene ID: HRGMv2_4309_15_30
Type: CAZyme
Location: 46777 - 47631 (+)
Gene ID: HRGMv2_4309_15_31
Type:
Location: 47618 - 48886 (+)
Gene ID: HRGMv2_4309_15_32
Type: pfam
Location: 48887 - 49672 (+)
Gene ID: HRGMv2_4309_15_33
Type: TC
Location: 49702 - 50490 (+)
Gene ID: HRGMv2_4309_15_34
Type: pfam
Location: 50509 - 52518 (+)
Gene ID: HRGMv2_4309_15_35
Type: TC
Location: 52694 - 53941 (+)
Gene ID: HRGMv2_4309_15_36
Type: TC
Location: 53942 - 54853 (+)
Gene ID: HRGMv2_4309_15_37
Type: TC
Location: 54854 - 55684 (+)
Gene ID: HRGMv2_4309_15_38
Type:
Location: 55692 - 56975 (+)
Gene ID: HRGMv2_4309_15_39
Type: TC
Location: 56979 - 58709 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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