PROTEIN: HRGMv2_4309_15_31
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Protein File & Metadata
Source:
HRGMv2_4309_15_31.pdb
Genome ID:
Protein ID:
HRGMv2_4309_15_31
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Protein Sequence
MLKNNTDTET VIKKSTEQIF APVMYAYISW VLDQARRDKI QRLYFLARDG FQMYLAAKIL 60 CQERGEKIQC RYLKCSRYAL RVPAYFLMGR DCLDLICQGG TDVTLGKVLK RSGLSREEIP 120 LWARRLGAET WLDRILSYRE VQKLKGVLAG SEGFLERIHE ISREAYPAAV GYLRQEGLLE 180 EVPYALVDSG WIGTLQQTLE LLLKKEGKTE ALKGFYFGLY EIPKGADREK YRAYYFLPTG 240 KIKRKVYFCN SLFECVFSAP EGMTLHYRKE DNEYLPADGG RENPNKKQLE IITEILCRRV 300 RRLAKKNRKI KEKKVEKLLS DFMGYPAREE AEVFGGFHFT GDVLEKKGEL LAAGLSEKEI 360 RNNHFFSKSL ILLGLKKGPV QESGWIEGSV VNCGRHVKRH LRQIRLYKYL LYIRKALMER 420 WK 422
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 8 | 402 | 239 | 631 | 0.6481 |
0.8377 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0U5F758-F1-model_v4 | GT2 | 1 | 410 | 1 | 403 | 0.5904 |
0.7646 |
| AF-W0DNV7-F1-model_v4 | GT2 | 7 | 418 | 670 | 1091 | 0.5796 |
0.858 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 8 | 417 | 651 | 1067 | 0.578 |
0.8544 |
| A0A1I7GMF6 | GT2 | 7 | 413 | 668 | 1083 | 0.5763 |
0.8612 |
| A0A9J7AXY3 | GT2 | 1 | 413 | 1 | 399 | 0.5734 |
0.7831 |
| V4JBH5 | GT2 | 6 | 410 | 1 | 398 | 0.5649 |
0.7821 |
| A0A974WXG9 | GT4 | 8 | 407 | 674 | 1078 | 0.5573 |
0.8504 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 6 | 410 | 6 | 405 | 0.5549 |
0.7746 |
| AF-W8KPG0-F1-model_v4 | GT2 | 9 | 411 | 8 | 398 | 0.5379 |
0.7773 |
| QRK05458.1 | GT4 | 6 | 421 | 268 | 991 | 0.5318 |
0.7979 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0U5F758 | GT2 | 1 | 410 | 1 | 403 | 0.5904 |
0.7646 |
| A0A2I6S8V6 | GT2 | 8 | 417 | 651 | 1067 | 0.578 |
0.8544 |
| A0A1I7GMF6 | GT2 | 7 | 413 | 668 | 1083 | 0.5763 |
0.8612 |
| A0A9J7AXY3 | GT2 | 1 | 413 | 1 | 399 | 0.5734 |
0.7831 |
| V4JBH5 | GT2 | 6 | 410 | 1 | 398 | 0.5649 |
0.7821 |
| A0A974WXG9 | GT4 | 8 | 407 | 674 | 1078 | 0.5573 |
0.8504 |
| A0A0H3KC95 | GT2 | 6 | 410 | 6 | 405 | 0.5549 |
0.7746 |
| W8KPG0 | GT2 | 9 | 411 | 8 | 398 | 0.5379 |
0.7773 |
| QRK05458.1 | GT4 | 6 | 421 | 268 | 991 | 0.5318 |
0.7979 |
| M4S1R1 | GT4 | 14 | 410 | 256 | 723 | 0.5211 |
0.7881 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 10 | 337 | 253 | 591 | 0.5693 |
0.8473 |
| 8a0m-assembly1.cif.gz_B | 5 | 406 | 499 | 876 | 0.5358 |
0.8289 |
| 8a0c-assembly1.cif.gz_A | 5 | 406 | 637 | 1028 | 0.5319 |
0.8297 |
| 8a0m-assembly2.cif.gz_C | 5 | 406 | 633 | 1024 | 0.5319 |
0.8288 |
| 8a0m-assembly1.cif.gz_A | 5 | 406 | 632 | 1023 | 0.5316 |
0.8281 |
| 8a0c-assembly1.cif.gz_B | 5 | 406 | 637 | 1025 | 0.5228 |
0.8198 |
| 8a0m-assembly2.cif.gz_D | 5 | 406 | 528 | 887 | 0.5045 |
0.8175 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.