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Cluster: HRGMv2_4308_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4308_5 HRGMv2_4308_5_2 209 1582 + 3.A.1.1.40
CAZyme HRGMv2_4308_5 HRGMv2_4308_5_3 1601 2911 + GH4
pfam HRGMv2_4308_5 HRGMv2_4308_5_4 2927 3952 + PdxA
peptidase HRGMv2_4308_5 HRGMv2_4308_5_5 4100 5554 + I04.UPW
TC HRGMv2_4308_5 HRGMv2_4308_5_6 5833 6750 + 3.A.1.5.2
TC HRGMv2_4308_5 HRGMv2_4308_5_7 6767 7918 + 3.A.1.5.2
TC HRGMv2_4308_5 HRGMv2_4308_5_8 7928 9010 + 3.A.1.5.15
TC HRGMv2_4308_5 HRGMv2_4308_5_9 9007 9969 + 3.A.1.5.20
TC HRGMv2_4308_5 HRGMv2_4308_5_10 10117 11811 + 3.A.1.5.18
Gene ID: HRGMv2_4308_5_2
Type: TC
Location: 209 - 1582 (+)
Gene ID: HRGMv2_4308_5_3
Type: CAZyme
Location: 1601 - 2911 (+)
Gene ID: HRGMv2_4308_5_4
Type: pfam
Location: 2927 - 3952 (+)
Gene ID: HRGMv2_4308_5_5
Type: peptidase
Location: 4100 - 5554 (+)
Gene ID: HRGMv2_4308_5_6
Type: TC
Location: 5833 - 6750 (+)
Gene ID: HRGMv2_4308_5_7
Type: TC
Location: 6767 - 7918 (+)
Gene ID: HRGMv2_4308_5_8
Type: TC
Location: 7928 - 9010 (+)
Gene ID: HRGMv2_4308_5_9
Type: TC
Location: 9007 - 9969 (+)
Gene ID: HRGMv2_4308_5_10
Type: TC
Location: 10117 - 11811 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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