Cluster: HRGMv2_4308_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4308
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4308_4 | HRGMv2_4308_4_17 | 20048 | 21001 | + | GT2 |
| CAZyme | HRGMv2_4308_4 | HRGMv2_4308_4_18 | 21029 | 23281 | + | GT2 | GT2 |
| CAZyme | HRGMv2_4308_4 | HRGMv2_4308_4_19 | 23278 | 24273 | + | GT2 |
| TC | HRGMv2_4308_4 | HRGMv2_4308_4_20 | 24462 | 25880 | + | 9.B.18.1.1 |
Gene ID: HRGMv2_4308_4_17
Type: CAZyme
Location: 20048 - 21001 (+)
Type: CAZyme
Location: 20048 - 21001 (+)
Gene ID: HRGMv2_4308_4_18
Type: CAZyme
Location: 21029 - 23281 (+)
Type: CAZyme
Location: 21029 - 23281 (+)
Gene ID: HRGMv2_4308_4_19
Type: CAZyme
Location: 23278 - 24273 (+)
Type: CAZyme
Location: 23278 - 24273 (+)
Gene ID: HRGMv2_4308_4_20
Type: TC
Location: 24462 - 25880 (+)
Type: TC
Location: 24462 - 25880 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.